Evidence map›Paper›PMID 28063496›Full record

ArticleMethods in enzymology2017

Measuring Phospholipase D Enzymatic Activity Through Biochemical and Imaging Methods.

F Philip, E E Ha, M A Seeliger, M A Frohman

Abstract read
In one paragraph

Article in Methods in enzymology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  7. A real-time, click chemistry imaging approach reveals stimulus-specific subcellular locations of phospholipase D activity.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

F PhilipCenter for Developmental Genetics, Stony Brook University School of Medicine, Stony Brook, NY, United States.
E E HaCenter for Developmental Genetics, Stony Brook University School of Medicine, Stony Brook, NY, United States.
M A SeeligerCenter for Developmental Genetics, Stony Brook University School of Medicine, Stony Brook, NY, United States.
M A FrohmanCenter for Developmental Genetics, Stony Brook University School of Medicine, Stony Brook, NY, United States. Electronic address: michael.frohman@stonybrook.edu.
Stony Brook University · US

Funding

Dynamics of Ligand Binding and Protein Kinase Regulation_RenewalR35GM119437 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI Markus A Seeliger · 2016 to 2026
$6.5M
Lipid-signaling pathways regulating mitochondrial morphology, energetics, and movR01GM084251 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 2009 to 2017
$2.6M
Regulation of RNA processing on the mitochondrial surface by lipid signalingR01GM100109 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FROHMAN, MICHAEL A. · 2012 to 2015
$1.2M
NIGMS NIH HHS R01 GM084251NIGMS NIH HHS R01 GM100109NIGMS NIH HHS R35 GM119437
6 · The paper itself

Abstract

The phospholipase D (PLD) enzymatic superfamily regulates a wide range of cell biological and physiological pathways, including platelet activation, immune responses, cancer, and spermatogenesis. The three main enzymatic actions of the superfamily entail (i) hydrolyzing membrane phospholipids (phosphatidylcholine (PC) and cardiolipin) to generate choline and the second messenger signaling lipid phosphatidic acid (PA), (ii) using ethanol to transphosphatidylate PC to generate the long-lived metabolite phosphatidylethanol, and (iii) hydrolyzing RNA transcripts to generate piRNAs, the third form of endogenous RNAi. We discuss briefly previously published methods for in vitro and in vivo detection and imaging of PA, and focus on production, purification, and in vitro endonuclease activity analysis for human PLD6, a mitochondrial-tethered isoform with roles in fertility, cancer, and neuronal homeostasis.

Indexed as

Enzyme AssaysAnimalsCardiolipinsDiglyceridesEnzyme ActivationGlycerophospholipidsHumansHydrolysisIsoenzymesMitochondrial ProteinsMolecular ImagingPhosphatidic AcidsPhosphatidylcholinesPhospholipase DRecombinant ProteinsRNA, MessengerCardiolipinsDiglyceridesGlycerophospholipidsIsoenzymesMitochondrial ProteinsPhosphatidic AcidsPhosphatidylcholinesphosphatidylethanolPhospholipase DRecombinant ProteinsRNA, MessengerRNA, Small InterferingBiochemical assayEndonucleaseFluorescent sensorPhosphatidic acidPhospholipase D

Identifiers

PMID28063496
PMCPMC5708542
OpenAlexW2531991921

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.