ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
Genome-wide gene expression patterns in dikaryon of the basidiomycete fungus Pleurotus ostreatus.
Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Article
- A Review of Genomic, Transcriptomic, and Proteomic Applications in Edible Fungi Biology: Current Status and Future Directions.Journal of fungi (Basel, Switzerland) · 2025Review
- Haplotype-resolved genomes ofIMA fungus · 2025Article
- Telomere-to-Telomere Haplotype-Resolved Genomes ofJournal of fungi (Basel, Switzerland) · 2024Article
- Increasing the production of the bioactive compounds in medicinal mushrooms: an omics perspective.Microbial cell factories · 2023Review
- Nuclear-specific gene expression in heterokaryons of the filamentous ascomyceteProceedings. Biological sciences · 2022Article
- Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi:Biomolecules · 2022Article
- MonokaryoticInternational journal of molecular sciences · 2021Article
- Genetic improvement in3 Biotech · 2019Review
- Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi.The ISME journal · 2019Article
- Article
- Adenosine to inosine mRNA editing in fungi and how it may relate to fungal pathogenesis.PLoS pathogens · 2018Review
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Authors and funding
8 authors.
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Abstract
Dikarya is a subkingdom of fungi that includes Ascomycota and Basidiomycota. The gene expression patterns of dikaryon are poorly understood. In this study, we bred a dikaryon DK13×3 by mating monokaryons MK13 and MK3, which were from the basidiospores of Pleurotus ostreatus TD300. Using RNA-Seq, we obtained the transcriptomes of the three strains. We found that the total transcript numbers in the transcriptomes of the three strains were all more than ten thousand, and the expression profile in DK13×3 was more similar to MK13 than MK3. However, the genes involved in macromolecule utilization, cellular material synthesis, stress-resistance and signal transduction were much more up-regulated in the dikaryon than its constituent monokaryons. All possible modes of differential gene expression, when compared to constituent monokaryons, including the presence/absence variation, and additivity/nonadditivity gene expression in the dikaryon may contribute to heterosis. By sequencing the urease gene poure sequences and mRNA sequences, we identified the monoallelic expression of the poure gene in the dikaryon, and its transcript was from the parental monokaryon MK13. Furthermore, we discovered RNA editing in the poure gene mRNA of the three strains. These results suggest that the gene expression patterns in dikaryons should be similar to that of diploids during vegetative growth.
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