Evidence map›Paper›PMID 28098184›Full record

ArticleNature communications2017

Infrared laser-induced gene expression for tracking development and function of single C. elegans embryonic neurons.

Anupriya Singhal, Shai Shaham

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Embryonic Development of Caenorhabditis elegans Sense Organs.The Journal of comparative neurology · 2025
    Article
  3. Glia Development and Function in the NematodeCold Spring Harbor perspectives in biology · 2024
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Journal of developmental biology · 2020
    Review
  14. Probing and manipulating embryogenesis via nanoscale thermometry and temperature control.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Novel Technological Advances in Functional Connectomics inJournal of developmental biology · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Split cGAL, an intersectional strategy using a split intein for refined spatiotemporal transgene control inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Anupriya SinghalLaboratory of Developmental Genetics, The Rockefeller University, 1230 York Avenue, New York, New York 10065, USA.
Shai ShahamLaboratory of Developmental Genetics, The Rockefeller University, 1230 York Avenue, New York, New York 10065, USA.

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Glial control of sensory neuron functionR01NS064273 · NINDS · ROCKEFELLER UNIVERSITY · PI SHAHAM, SHAI · 2008 to 2017
$3.7M
Control of nonapoptotic C. elegans cell death similar to neurodegenerationR01NS081490 · NINDS · ROCKEFELLER UNIVERSITY · PI SHAHAM, SHAI · 2012 to 2017
$2.2M
Control of Linker Cell Death in C. elegansR01HD078703 · NICHD · ROCKEFELLER UNIVERSITY · PI SHAHAM, SHAI · 2014 to 2018
$1.7M
NICHD NIH HHS R01 HD078703NIGMS NIH HHS T32 GM007739NINDS NIH HHS R01 NS064273NINDS NIH HHS R01 NS081490
6 · The paper itself

Abstract

Visualizing neural-circuit assembly in vivo requires tracking growth of optically resolvable neurites. The Caenorhabditis elegans embryonic nervous system, comprising 222 neurons and 56 glia, is attractive for comprehensive studies of development; however, embryonic reporters are broadly expressed, making single-neurite tracking/manipulation challenging. We present a method, using an infrared laser, for reproducible heat-dependent gene expression in small sublineages (one to four cells) without radiation damage. We go beyond proof-of-principle, and use our system to label and track single neurons during early nervous-system assembly. We uncover a retrograde extension mechanism for axon growth, and reveal the aetiology of axon-guidance defects in sax-3/Robo and vab-1/EphR mutants. We also perform cell-specific rescues, determining DAF-6/patched-related site of action during sensory-organ development. Simultaneous ablation and labelling of cells using our system reveals roles for glia in dendrite extension. Our method can be applied to other optically/IR-transparent organisms, and opens the door to high-resolution systematic analyses of C. elegans morphogenesis.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell Cycle ProteinsHot TemperatureInfrared RaysLasersNerve Tissue ProteinsNeuronsReceptor Protein-Tyrosine KinasesReceptors, ImmunologicRoundabout ProteinsCaenorhabditis elegans ProteinsCell Cycle ProteinsDAF-6 protein, C elegansNerve Tissue ProteinsReceptor Protein-Tyrosine KinasesReceptors, ImmunologicRoundabout Proteinsvab-1 protein, C elegans

Identifiers

PMID28098184
PMCPMC5253673

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.