Evidence map›Paper›PMID 28158855›Full record

ArticlePlant & cell physiology2017

In Vivo Imaging of Diacylglycerol at the Cytoplasmic Leaflet of Plant Membranes.

Joop E M Vermeer, Ringo van Wijk, Joachim Goedhart, Niko Geldner, Joanne Chory, Theodorus W J Gadella, Teun Munnik

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Imaging Plant Lipids with Fluorescent Reporters.Plants (Basel, Switzerland) · 2024
    Review
  5. Exploring lipid-protein interactions in plant membranes.Journal of experimental botany · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Phospholipids in Salt Stress Response.Plants (Basel, Switzerland) · 2021
    Review
  15. Article
  16. Characterization of theFrontiers in plant science · 2021
    Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Joop E M VermeerSection of Plant Physiology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, NL-1098XH, Amsterdam, The Netherlands.
Ringo van WijkSection of Plant Physiology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, NL-1098XH, Amsterdam, The Netherlands.
Joachim GoedhartSection of Molecular Cytology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, NL-1098XH, Amsterdam, The Netherlands.
Niko GeldnerDepartment of Plant Molecular Biology, University of Lausanne-Sorge, Lausanne 1015, Switzerland.
Joanne ChoryPlant Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA.
Theodorus W J GadellaSection of Molecular Cytology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, NL-1098XH, Amsterdam, The Netherlands.
Teun MunnikSection of Plant Physiology, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, NL-1098XH, Amsterdam, The Netherlands.
Netherlands Institute for Neuroscience · NLUniversity of Amsterdam · NLUniversity of Lausanne · CHSalk Institute for Biological Studies · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diacylglycerol (DAG) is an important intermediate in lipid biosynthesis and plays key roles in cell signaling, either as a second messenger itself or as a precursor of phosphatidic acid. Methods to identify distinct DAG pools have proven difficult because biochemical fractionation affects the pools, and concentrations are limiting. Here, we validate the use of a genetically encoded DAG biosensor in living plant cells. The sensor is composed of a fusion between yellow fluorescent protein and the C1a domain of protein kinase C (YFP-C1aPKC) that specifically binds DAG, and was stably expressed in suspension-cultured tobacco BY-2 cells and whole Arabidopsis thaliana plants. Confocal imaging revealed that the majority of the YFP-C1aPKC fluorescence did not locate to membranes but was present in the cytosol and nucleus. Treatment with short-chain DAG or PMA (phorbol-12-myristate-13-acetate), a phorbol ester that binds the C1a domain of PKC, caused the recruitment of the biosensor to the plasma membrane. These results indicate that the biosensor works and that the basal DAG concentration in the cytoplasmic leaflet of membranes (i.e. accessible to the biosensor) is in general too low, and confirms that the known pools in plastids, the endoplasmic reticulum and mitochondria are located at the luminal face of these compartments (i.e. inaccessible to the biosensor). Nevertheless, detailed further analysis of different cells and tissues discovered four novel DAG pools, namely at: (i) the trans-Golgi network; (ii) the cell plate during cytokinesis; (iii) the plasma membrane of root epidermal cells in the transition zone, and (iv) the apex of growing root hairs. The results provide new insights into the spatiotemporal dynamics of DAG in plants and offer a new tool to monitor this in vivo.

Indexed as

ArabidopsisBiosensing TechniquesCell MembraneCells, CulturedCytokinesisCytosolDiglyceridesEndoplasmic ReticulumMicroscopy, ConfocalMitochondriaNicotianaPhorbol EstersPlant EpidermisPlant RootsProtein DomainsProtein Kinase C1,2-diacylglycerolDiglyceridesphorbol-12-myristatePhorbol EstersProtein Kinase CArabidopsis thalianaBiosensorDiacylglycerolPhospholipase CTobacco BY-2

Identifiers

PMID28158855
PMCPMC6200129
OpenAlexW2584717602

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.