Evidence map›Paper›PMID 28165452›Full record

ArticleNature communications2017

DEK-targeting DNA aptamers as therapeutics for inflammatory arthritis.

Nirit Mor-Vaknin, Anjan Saha, Maureen Legendre, Carmelo Carmona-Rivera, M Asif Amin, Bradley J Rabquer, Marta J Gonzales-Hernandez, Julie Jorns, Smriti Mohan, Srilakshmi Yalavarthi and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 2 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 2 syntheses or guidelines pooled it, 102 citations in OpenAlex.

  1. Pooled it
  2. Application of aptamers in regenerative medicine.Frontiers in bioengineering and biotechnology · 2022
    Pooled it
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  20. Neutrophil extracellular traps in homeostasis and disease.Signal transduction and targeted therapy · 2024
    Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 1 country.

Nirit Mor-VakninDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan, Ann Arbor, Michigan 48109, USA.
Anjan SahaDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan, Ann Arbor, Michigan 48109, USA.
Maureen LegendreDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan, Ann Arbor, Michigan 48109, USA.
Carmelo Carmona-RiveraSystemic Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, Bethesda, Maryland 20892, USA.ORCID 0000-0002-7706-1464
M Asif AminDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Bradley J RabquerDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Marta J Gonzales-HernandezDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan, Ann Arbor, Michigan 48109, USA.
Julie JornsDepartment of Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Smriti MohanDepartment of Pediatrics and Communicable Diseases, Division of Pediatric Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Srilakshmi YalavarthiDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Dave A PaiDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.
Kristine AngevineDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.
Shelley J AlmburgMicroscopy &Image - Analysis Laboratory, University of Michigan, Ann Arbor, Michigan 48109, USA.
Jason S KnightDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Barbara S AdamsDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan, Ann Arbor, Michigan 48109, USA.
Alisa E KochDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
David A FoxDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, Michigan 48109, USA.
David R EngelkeDepartment of Biological Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.
Mariana J KaplanSystemic Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, Bethesda, Maryland 20892, USA.
David M MarkovitzDepartment of Internal Medicine, Division of Infectious Diseases, University of Michigan, Ann Arbor, Michigan 48109, USA.
University of Michigan · USNational Institute of Arthritis and Musculoskeletal and Skin Diseases · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 1988 to 2026
$178.2M
MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
Systemic AutoimmunityZIAAR041199 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI KAPLAN, MARIANA · 2014 to 2025
$32.5M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
TRAINING OF ARTHRITIS RESEARCH SCIENTISTST32AR007080 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Jason Knight · 1986 to 2026
$6.3M
UNIQUE SURFACE STRUCTURES ON SYNOVIAL CELLSR01AR038477 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FOX, DAVID ALAN · 1991 to 2011
$2.9M
DEK Regulation of Hematopoietic Stem Cell Renewal, Fate, and HematopoiesisR01DK109188 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI BROXMEYER, HAL E., MARKOVITZ, DAVID MICHAEL · 2016 to 2019
$2.0M
CXC Chemokines and HIV PathogenesisR01AI062248 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARKOVITZ, DAVID MICHAEL · 2005 to 2009
$1.6M
Innate Immunity in the Pathogenesis of Lupus and Antiphospholipid VasculopathyK08AR066569 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KNIGHT, JASON · 2014 to 2018
$692k
University of Michigan Autoimmunity Center of Excellence, Clinical Research ProgrUM1AI110557 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FOX, DAVID ALAN · 2014 to 2018
$543k
The Role of DEK in the Development of ArthritisK01AR055620 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MOR-VAKNIN, NIRIT · 2009 to 2013
$541k
Role of the 4A11 antigen in rheumatoid arthritisR03AR052482 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AMIN, MOHAMMAD A · 2006 to 2008
$221k
NCI NIH HHS F30 CA210379NCI NIH HHS F31 CA150523NCI NIH HHS P30 CA046592NHLBI NIH HHS F32 HL094017NIAID NIH HHS R01 AI062248NIAID NIH HHS UM1 AI110557NIAMS NIH HHS K01 AR055620NIAMS NIH HHS K08 AR066569NIAMS NIH HHS R01 AR038477NIAMS NIH HHS R03 AR052482NIAMS NIH HHS R03 AR056748NIAMS NIH HHS T32 AR007080NIDDK NIH HHS R01 DK109188NIGMS NIH HHS T32 GM007544NIGMS NIH HHS T32 GM007863
6 · The paper itself

Abstract

Novel therapeutics are required for improving the management of chronic inflammatory diseases. Aptamers are single-stranded RNA or DNA molecules that have recently shown utility in a clinical setting, as they can specifically neutralize biomedically relevant proteins, particularly cell surface and extracellular proteins. The nuclear chromatin protein DEK is a secreted chemoattractant that is abundant in the synovia of patients with juvenile idiopathic arthritis (JIA). Here, we show that DEK is crucial to the development of arthritis in mouse models, thus making it an appropriate target for aptamer-based therapy. Genetic depletion of DEK or treatment with DEK-targeted aptamers significantly reduces joint inflammation in vivo and greatly impairs the ability of neutrophils to form neutrophil extracellular traps (NETs). DEK is detected in spontaneously forming NETs from JIA patient synovial neutrophils, and DEK-targeted aptamers reduce NET formation. DEK is thus key to joint inflammation, and anti-DEK aptamers hold promise for the treatment of JIA and other types of arthritis.

Indexed as

AdultAnimalsAptamers, NucleotideArthritis, JuvenileChemotactic FactorsChromosomal Proteins, Non-HistoneDisease Models, AnimalDNA-Binding ProteinsExtracellular TrapsFemaleHealthy VolunteersHumansMaleMiceMice, Inbred C57BLMice, KnockoutAptamers, NucleotideChemotactic FactorsChromosomal Proteins, Non-HistoneDEK protein, humanDEK protein, mouseDNA-Binding ProteinsOncogene ProteinsPoly-ADP-Ribose Binding ProteinsZymosan

Identifiers

PMID28165452
PMCPMC5303823
OpenAlexW2587727342

What Socratic holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.