Evidence map›Paper›PMID 28167698›Full record

ArticleThe Biochemical journal2017

ADAR1 and PACT contribute to efficient translation of transcripts containing HIV-1 trans-activating response (TAR) element.

Evelyn Chukwurah, Indhira Handy, Rekha C Patel

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Focus on Translation Initiation of the HIV-1 mRNAs.International journal of molecular sciences · 2018
    Review
  10. Review
  11. Defining Pharmacological Targets by Analysis of Virus-Host Protein Interactions.Advances in protein chemistry and structural biology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Evelyn ChukwurahDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, U.S.A.
Indhira HandyDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, U.S.A.
Rekha C PatelDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, U.S.A. patelr@biol.sc.edu.
University of South Carolina · US

Funding

Targeting NMDA Receptors and Brain Estradiol to Rescue Memory in Aging FemalesP20GM109091 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI RONINSON, IGOR B · 2014 to 2024
$25.2M
NIGMS NIH HHS P20 GM109091
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1) has evolved various measures to counter the host cell's innate antiviral response during the course of infection. Interferon (IFN)-stimulated gene products are produced following HIV-1 infection to limit viral replication, but viral proteins and RNAs counteract their effect. One such mechanism is specifically directed against the IFN-induced Protein Kinase PKR, which is centrally important to the cellular antiviral response. In the presence of viral RNAs, PKR is activated and phosphorylates the translation initiation factor eIF2α. This shuts down the synthesis of both host and viral proteins, allowing the cell to mount an effective antiviral response. PACT (protein activator of PKR) is a cellular protein activator of PKR, primarily functioning to activate PKR in response to cellular stress. Recent studies have indicated that during HIV-1 infection, PACT's normal cellular function is compromised and that PACT is unable to activate PKR. Using various reporter systems and

Indexed as

Protein BiosynthesisAdenosine DeaminaseAnimalseIF-2 KinaseEukaryotic Initiation Factor-2FibroblastsGene Expression RegulationGenes, ReporterHEK293 CellsHeLa CellsHIV-1Host-Pathogen InteractionsHumansLuciferasesMiceRNA-Binding ProteinsADAR protein, humanAdenosine DeaminaseEIF2AK2 protein, humaneIF-2 KinaseEukaryotic Initiation Factor-2LuciferasesPRKRA protein, humanRNA-Binding Proteinstat Gene Products, Human Immunodeficiency VirusADAR1HIV-1interferonsPACTPKRTat

Identifiers

PMID28167698
PMCPMC5363390
OpenAlexW2586773602

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.