Evidence map›Paper›PMID 28418645›Full record

ArticleACS chemical neuroscience2017

Brain Region and Isoform-Specific Phosphorylation Alters Kalirin SH2 Domain Interaction Sites and Calpain Sensitivity.

Megan B Miller, Yan Yan, Kazuya Machida, Drew D Kiraly, Aaron D Levy, Yi I Wu, TuKiet T Lam, Thomas Abbott, Anthony J Koleske, Betty A Eipper and 1 more

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Synaptic memory and CaMKII.Physiological reviews · 2023
    Review
  4. Regulated processing and secretion of a peptide precursor in cilia.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Identifying roles for peptidergic signaling in mice.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Megan B Miller
Yan Yan
Kazuya Machida
Drew D KiralyDepartment of Psychiatry, Icahn School of Medicine at Mount Sinai , New York, New York 10029, United States.
Aaron D Levy
Yi I Wu
TuKiet T Lam
Thomas Abbott
Anthony J Koleske
Betty A Eipper
Icahn School of Medicine at Mount Sinai · US

Funding

Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI TuKiet T Lam · 2004 to 2026
$37.1M
CELL BIOLOGY OF BIOACTIVE PEPTIDE SECRETIONR01DK032948 · NIDDK · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI EIPPER, ELIZABETH ANNE, MAINS, RICHARD E · 1986 to 2019
$7.3M
Dynamics and Topology of Phosphotyrosine-SH2 Interaction NetworksU01CA154966 · NCI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI MAYER, BRUCE J., WHITE, FOREST M · 2011 to 2015
$2.4M
Supplement to Regulation of invadopodia formation in breast cancer cellsR01CA133346 · NCI · YALE UNIVERSITY · PI KOLESKE, ANTHONY J · 2009 to 2016
$2.3M
Imaging Tools to Visualize and Manipulate Signaling in Minute Spaces (Admin Supp)R01GM117061 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI WU, YI · 2016 to 2020
$2.0M
Laminin control of CNS dendrite and dendritic spine developmentR01NS089662 · NINDS · YALE UNIVERSITY · PI GRUTZENDLER, JAIME, KOLESKE, ANTHONY J · 2014 to 2018
$1.8M
Dissecting the role of one neuronal RhoGEF amongst many: the Kalirin-7 null mouseR01DA023082 · NIDA · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI MAINS, RICHARD E · 2008 to 2012
$1.6M
Cell Biology of Bioactive Peptide SecretionR56DK032948 · NIDDK · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI MAINS, RICHARD E · 2008 to 2008
$303k
Integrin-Arg-SHP2 signaling regulates NMDAR function and neuron morphologyF31MH105043 · NIMH · YALE UNIVERSITY · PI LEVY, AARON DONALD · 2014 to 2016
$92k
NCI NIH HHS R01 CA133346NCI NIH HHS U01 CA154966NIDA NIH HHS P30 DA018343NIDA NIH HHS R01 DA023082NIDDK NIH HHS R01 DK032948NIDDK NIH HHS R56 DK032948NIGMS NIH HHS R01 GM117061NIMH NIH HHS F31 MH105043NINDS NIH HHS R01 NS089662
6 · The paper itself

Abstract

Kalirin7 (Kal7), a postsynaptic Rho GDP/GTP exchange factor (RhoGEF), plays a crucial role in long-term potentiation and in the effects of cocaine on behavior and spine morphology. The KALRN gene has been linked to schizophrenia and other disorders of synaptic function. Mass spectrometry was used to quantify phosphorylation at 26 sites in Kal7 from individual adult rat nucleus accumbens and prefrontal cortex before and after exposure to acute or chronic cocaine. Region- and isoform-specific phosphorylation was observed along with region-specific effects of cocaine on Kal7 phosphorylation. Evaluation of the functional significance of multisite phosphorylation in a complex protein like Kalirin is difficult. With the identification of five tyrosine phosphorylation (pY) sites, a panel of 71 SH2 domains was screened, identifying subsets that interacted with multiple pY sites in Kal7. In addition to this type of reversible interaction, endoproteolytic cleavage by calpain plays an essential role in long-term potentiation. Calpain cleaved Kal7 at two sites, separating the N-terminal domain, which affects spine length, and the PDZ binding motif from the GEF domain. Mutations preventing phosphorylation did not affect calpain sensitivity or GEF activity; phosphomimetic mutations at specific sites altered protein stability, increased calpain sensitivity, and reduced GEF activity.

Indexed as

AnimalsBinding SitesCalpainCocaineDopamine Uptake InhibitorsGuanine Nucleotide Exchange FactorsHEK293 CellsHumansMaleMass SpectrometryNucleus AccumbensPDZ DomainsPhosphorylationPrefrontal CortexProtein Isoformsrac1 GTP-Binding ProteinCalpainCocaineDopamine Uptake InhibitorsGuanine Nucleotide Exchange FactorsKalrn protein, ratProtein Isoformsrac1 GTP-Binding ProteinRac1 protein, ratTyrosinecocainemass spectrometrynucleus accumbensprefrontal cortexRhoGEFtyrosine phosphorylation

Identifiers

PMID28418645
PMCPMC5517348
OpenAlexW2606845713

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.