Evidence map›Paper›PMID 28439555›Full record

ArticleScience advances2017

Structural and biochemical differences between the Notch and the amyloid precursor protein transmembrane domains.

Catherine L Deatherage, Zhenwei Lu, Brett M Kroncke, Sirui Ma, Jarrod A Smith, Markus W Voehler, Robert L McFeeters, Charles R Sanders

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  7. Notch signaling pathway: architecture, disease, and therapeutics.Signal transduction and targeted therapy · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Catherine L DeatherageDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Zhenwei LuDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.
Brett M KronckeDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.ORCID 0000-0001-6215-0803
Sirui MaDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.ORCID 0000-0002-3005-4339
Jarrod A SmithDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.ORCID 0000-0003-0895-2922
Markus W VoehlerCenter for Structural Biology and Institute of Chemical Biology, Vanderbilt University, Nashville, TN 37235, USA.ORCID http://orcid.org/0000-0002-9509-6396
Robert L McFeetersDepartment of Chemistry, University of Alabama in Huntsville, Huntsville, AL 35899, USA.
Charles R SandersDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.ORCID http://orcid.org/0000-0003-2046-2862
Vanderbilt University · USUniversity of Alabama in Huntsville · US

Funding

The Laminin Receptors in Kidney FibrosisR01DK069921 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ROY ZENT · 2005 to 2026
$9.5M
Cholesterol and the Amyloid Precursor ProteinR01GM106672 · NIGMS · VANDERBILT UNIVERSITY · PI SANDERS, CHARLES R · 2013 to 2016
$1.2M
Upgrade of GE 3.0T SIGNA MRI Scanner for Enhanced NeuroimagingS10RR026677 · NCRR · MEDICAL COLLEGE OF WISCONSIN · PI HYDE, JAMES S · 2010 to 2010
$500k
GPU-Accelerated Parallel Computer for Drug Discovery ApplicationsS10OD020154 · OD · VANDERBILT UNIVERSITY · PI SMITH, JARROD ANSON · 2015 to 2015
$225k
Structural rationale for open-state-inducing mutation in human Iks-producing potassium channel complexF32GM113355 · NIGMS · VANDERBILT UNIVERSITY · PI KRONCKE, BRETT M · 2015 to 2015
$54k
NCRR NIH HHS S10 RR026677NIDDK NIH HHS R01 DK069921NIGMS NIH HHS F32 GM113355NIGMS NIH HHS R01 GM106672
6 · The paper itself

Abstract

γ-Secretase cleavage of the Notch receptor transmembrane domain is a critical signaling event for various cellular processes. Efforts to develop inhibitors of γ-secretase cleavage of the amyloid-β precursor C99 protein as potential Alzheimer's disease therapeutics have been confounded by toxicity resulting from the inhibition of normal cleavage of Notch. We present biochemical and structural data for the combined transmembrane and juxtamembrane Notch domains (Notch-TMD) that illuminate Notch signaling and that can be compared and contrasted with the corresponding traits of C99. The Notch-TMD and C99 have very different conformations, adapt differently to changes in model membrane hydrophobic span, and exhibit different cholesterol-binding properties. These differences may be exploited in the design of agents that inhibit cleavage of C99 while allowing Notch cleavage.

Indexed as

Models, MolecularAmyloid beta-Protein PrecursorHumansNuclear Magnetic Resonance, BiomolecularProtein DomainsReceptors, NotchAmyloid beta-Protein PrecursorAPP protein, humanReceptors, Notchamyloid precursor proteinbicellesC99cholesterolMembraneNMRNotchreceptorstructuretransmembrane domain

Identifiers

PMID28439555
PMCPMC5389784
OpenAlexW2606438863

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.