Evidence map›Paper›PMID 28602767›Full record

ArticleJournal of virological methods2017

An easily transfectable cell line that produces an infectious reporter virus for routine and robust quantitation of Kaposi's sarcoma-associated herpesvirus reactivation.

Jennifer L DeCotiis, Noelle C Ortiz, Brian A Vega, David M Lukac

Open access · greenAbstract read
In one paragraph

Article in Journal of virological methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jennifer L DeCotiisDept. of Microbiology, Biochemistry, and Molecular Genetics, Graduate School of Biomedical Sciences, Rutgers Biomedical and Health Sciences, Rutgers University, New Jersey Medical School, 225 Warren St., ICPH E 350C, Newark, NJ, 07103, USA.
Noelle C OrtizDept. of Microbiology, Biochemistry, and Molecular Genetics, Graduate School of Biomedical Sciences, Rutgers Biomedical and Health Sciences, Rutgers University, New Jersey Medical School, 225 Warren St., ICPH E 350C, Newark, NJ, 07103, USA.
Brian A VegaDept. of Microbiology, Biochemistry, and Molecular Genetics, Graduate School of Biomedical Sciences, Rutgers Biomedical and Health Sciences, Rutgers University, New Jersey Medical School, 225 Warren St., ICPH E 350C, Newark, NJ, 07103, USA.
David M LukacDept. of Microbiology, Biochemistry, and Molecular Genetics, Graduate School of Biomedical Sciences, Rutgers Biomedical and Health Sciences, Rutgers University, New Jersey Medical School, 225 Warren St., ICPH E 350C, Newark, NJ, 07103, USA. Electronic address: Lukacdm@njms.rutgers.edu.
Rutgers, The State University of New Jersey · US

Funding

Re-specification of the Notch response by the HHV-8 lytic switch proteinR01AI078138 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI LUKAC, DAVID M · 2009 to 2013
$2.0M
Novel Notch Pathways Govern HHV-8 ReactivationR21AI117127 · NIAID · RBHS-NEW JERSEY MEDICAL SCHOOL · PI LUKAC, DAVID M · 2015 to 2016
$437k
NIAID NIH HHS R01 AI078138NIAID NIH HHS R21 AI117127
6 · The paper itself

Abstract

Reactivation of Kaposi's sarcoma-associated herpesvirus (KHSV; also known as Human herpesvirus (HHV)-8) from latency is associated with progression to disease. The primary experimental models for studying KSHV reactivation are B lymphocyte cell lines derived from patients with primary effusion lymphoma (PEL). PEL models have remained essential tools for understanding molecular details of latency and reactivation, yet they have shortcomings. In particular, PEL cells are difficult to transfect with plasmid DNA, which limits their routine use in studies that require introduction of exogenous DNA. Moreover, PELs produce poorly infectious virus, which limits functional quantitation of the ultimate step in KSHV reactivation. In this study, we show that a recently published reporter virus system overcomes inherent difficulties of using PELs for studying viral reactivation. Vero rKSHV.294 cells harbor a recombinant reporter KSHV clone and produce infectious virus whose quantitation is strictly dependent on passage to naïve 293 cells. We show that the cells are easily transfectable, and produce significant amount of infectious virus in response to ectopically-expressed lytic switch protein Rta. In thus study, we derive optimal conditions to measure fold reactivation by varying experimental time periods and media volumes in infections and reporter enzyme reactions, and by eliminating background cellular and media activities. By measuring production of infectious virus, we demonstrate that Rta, but not the cellular transactivator Notch Intracellular Domain (NICD)-1, is sufficient to reactivate KSHV from latency. These data confirm previous studies that were limited to measuring viral gene expression in PELs as indicators of reactivation.

Indexed as

Virus ActivationVirus LatencyCell LineGene Expression Regulation, ViralHerpesvirus 8, HumanHost-Pathogen InteractionsHumansImmediate-Early ProteinsTrans-ActivatorsTransfectionVirologyImmediate-Early ProteinsRta protein, Human herpesvirus 8Trans-ActivatorsHuman herpesvirus-8Infectious reporter virus quantitationKaposi’s sarcoma-associated herpesvirusReactivationReplication and transcriptional activator (Rta)Vero rKSHV.294 cells

Identifiers

PMID28602767
PMCPMC5543414
OpenAlexW2624543848

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.