Evidence map›Paper›PMID 28649789›Full record

ReviewPigment cell & melanoma research2017

Beyond MITF: Multiple transcription factors directly regulate the cellular phenotype in melanocytes and melanoma.

Hannah E Seberg, Eric Van Otterloo, Robert A Cornell

Open access · bronzeAbstract readReview
In one paragraph

Review in Pigment cell & melanoma research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 1 synthesis or guideline pooled it, 108 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Mapping of the hSOX10 protein interactome in human melanoma.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Functional Role of Protein Phosphatase-6 (Current medicinal chemistry · 2025
    Review
  16. SpecificbioRxiv : the preprint server for biology · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Hannah E SebergInterdisciplinary Graduate Program in Genetics, University of Iowa, Iowa City, IA, USA.
Eric Van OtterlooSDM-Craniofacial Biology, University of Colorado - Anschutz Medical Campus, Aurora, CO, USA.
Robert A CornellInterdisciplinary Graduate Program in Genetics, University of Iowa, Iowa City, IA, USA.ORCID 0000-0003-4207-9100
University of Iowa · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Jon C.D. Houtman · 2000 to 2026
$70.0M
Dissecting the transcriptional network governing differentiation of peridermR01DE023575 · NIDCR · UNIVERSITY OF WASHINGTON · PI CORNELL, ROBERT AARON, SCHUTTE, BRIAN C · 2013 to 2023
$4.3M
Regulation of the Melanocyte Lineage by the AP2 Transcription Factor FamilyR01AR062547 · NIAMS · UNIVERSITY OF WASHINGTON · PI CORNELL, ROBERT AARON · 2013 to 2022
$3.8M
Understanding the interaction of Memo1 and Runx2 in craniodental mineralizationK99DE026823 · NIDCR · UNIVERSITY OF COLORADO DENVER · PI VAN OTTERLOO, ERIC · 2017 to 2018
$261k
NIAMS NIH HHS R01 AR062547NIDCR NIH HHS K99 DE026823NIDCR NIH HHS R01 DE023575
6 · The paper itself

Abstract

MITF governs multiple steps in the development of melanocytes, including specification from neural crest, growth, survival, and terminal differentiation. In addition, the level of MITF activity determines the phenotype adopted by melanoma cells, whether invasive, proliferative, or differentiated. However, MITF does not act alone. Here, we review literature on the transcription factors that co-regulate MITF-dependent genes. ChIP-seq studies have indicated that the transcription factors SOX10, YY1, and TFAP2A co-occupy subsets of regulatory elements bound by MITF in melanocytes. Analyses at single loci also support roles for LEF1, RB1, IRF4, and PAX3 acting in combination with MITF, while sequence motif analyses suggest that additional transcription factors colocalize with MITF at many melanocyte-specific regulatory elements. However, the precise biochemical functions of each of these MITF collaborators and their contributions to gene expression remain to be elucidated. Analogous to the transcriptional networks in morphogen-patterned tissues during embryogenesis, we anticipate that the level of MITF activity is controlled not only by the concentration of activated MITF, but also by additional transcription factors that either quantitatively or qualitatively influence the expression of MITF-target genes.

Indexed as

AnimalsHumansMelanocytesMelanomaMicrophthalmia-Associated Transcription FactorModels, BiologicalPhenotypeTranscription FactorsMicrophthalmia-Associated Transcription FactorTranscription FactorsmelanocytesMITFSOX10TFAP2AYY1

Identifiers

PMID28649789
PMCPMC5939569
OpenAlexW2713351076

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.