Evidence map›Paper›PMID 28876235›Full record

ArticleActa crystallographica. Section D, Structural biology2017

2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update.

Jill Trewhella, Anthony P Duff, Dominique Durand, Frank Gabel, J Mitchell Guss, Wayne A Hendrickson, Greg L Hura, David A Jacques, Nigel M Kirby, Ann H Kwan and 12 more

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 153 papers.

0numbers the graph read from it
0cells of the map it votes in
153citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

153 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. SASBDB reaches 5000 data sets: empowering open science and next-generation SAS analysis.Acta crystallographica. Section D, Structural biology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Crystal structure of the virulence protein J (VirJ) domain 1 from Brucella abortus.Acta crystallographica. Section F, Structural biology communications · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. CuACS materials Au · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

93 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Jill TrewhellaSchool of Life and Environmental Sciences, The University of Sydney, NSW 2006, Australia.
Anthony P DuffANSTO, New Illawarra Road, Lucas Heights, NSW 2234, Australia.
Dominique DurandInstitut de Biologie Intégrative de la Cellule, UMR 9198, Bâtiment 430, Université Paris-Sud, 91405 Orsay CEDEX, France.
Frank GabelUniversité Grenoble Alpes, Commissariat à l'Energie Atomique (CEA), Centre National de la Recherche Scientifique (CNRS), Institut de Biologie Structurale (IBS), and Institut Laue-Langevin, 71 Avenue des Martyrs, 38000 Grenoble, France.
J Mitchell GussSchool of Life and Environmental Sciences, The University of Sydney, NSW 2006, Australia.
Wayne A HendricksonDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.
Greg L HuraMolecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
David A JacquesUniversity of Technology Sydney, ithree Institute, 15 Broadway, Ultimo, NSW 2007, Australia.
Nigel M KirbyAustralian Synchrotron, 800 Blackburn Road, Clayton, VIC 3168, Australia.
Ann H KwanSchool of Life and Environmental Sciences, The University of Sydney, NSW 2006, Australia.
Javier PérezSynchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin BP48, 91192 Gif-sur-Yvette CEDEX, France.
Lois PollackSchool of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853-2501, USA.
Timothy M RyanAustralian Synchrotron, 800 Blackburn Road, Clayton, VIC 3168, Australia.
Andrej SaliDepartment of Bioengineering and Therapeutic Sciences, Department of Pharmaceutical Chemistry, and California Institute for Quantitative Biosciences (QB3), University of California San Francisco, San Francisco, California, USA.
Dina Schneidman-DuhovnySchool of Computer Science and Engineering, Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel.
Torsten SchwedeBiozentrum, University of Basel and SIB Swiss Institute of Bioinformatics, Basel, Switzerland.
Dmitri I SvergunEuropean Molecular Biology Laboratory (EMBL) Hamburg, c/o DESY, Nokestrasse 85, 22607 Hamburg, Germany.
Masaaki SugiyamaResearch Reactor Institute, Kyoto University, Kumatori, Sennan-gun, Osaka 590-0494, Japan.
John A TainerBasic Science Research Division, Molecular and Cellular Oncology, MD Anderson Cancer Center, University of Texas, Houston, Texas, USA.
Patrice VachetteInstitut de Biologie Intégrative de la Cellule, UMR 9198, Bâtiment 430, Université Paris-Sud, 91405 Orsay CEDEX, France.
John WestbrookDepartment of Chemistry and Chemical Biology, Rutgers University, New Brunswick, NJ 07102, USA.
Andrew E WhittenANSTO, New Illawarra Road, Lucas Heights, NSW 2234, Australia.

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
NCI NIH HHS P01 CA092584
6 · The paper itself

Abstract

In 2012, preliminary guidelines were published addressing sample quality, data acquisition and reduction, presentation of scattering data and validation, and modelling for biomolecular small-angle scattering (SAS) experiments. Biomolecular SAS has since continued to grow and authors have increasingly adopted the preliminary guidelines. In parallel, integrative/hybrid determination of biomolecular structures is a rapidly growing field that is expanding the scope of structural biology. For SAS to contribute maximally to this field, it is essential to ensure open access to the information required for evaluation of the quality of SAS samples and data, as well as the validity of SAS-based structural models. To this end, the preliminary guidelines for data presentation in a publication are reviewed and updated, and the deposition of data and associated models in a public archive is recommended. These guidelines and recommendations have been prepared in consultation with the members of the International Union of Crystallography (IUCr) Small-Angle Scattering and Journals Commissions, the Worldwide Protein Data Bank (wwPDB) Small-Angle Scattering Validation Task Force and additional experts in the field.

Indexed as

Editorial PoliciesScattering, Small AngleX-Ray DiffractionAnimalsDatabases, ProteinDNAHumansModels, MolecularProteinsRNADNAProteinsRNAbiomolecular structureDNAhybrid structural modellingintegrative structural biologyproteinspublication guidelinesRNASANSSAXSsmall-angle scatteringstructural modelling

Identifiers

PMID28876235
PMCPMC5586245

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.