Evidence map›Paper›PMID 28931592›Full record

ArticleMolecular biology of the cell2017

Ubiquitin ligase SPSB4 diminishes cell repulsive responses mediated by EphB2.

Fumihiko Okumura, Akiko Joo-Okumura, Keisuke Obara, Alexander Petersen, Akihiko Nishikimi, Yoshinori Fukui, Kunio Nakatsukasa, Takumi Kamura

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Ubiquitin Proteasome Gene Signatures in Ependymoma Molecular Subtypes.International journal of molecular sciences · 2022
    Review
  5. Article
  6. The Roles of EphB2 in Cancer.Frontiers in cell and developmental biology · 2022
    Review
  7. Article
  8. Expression levels ofOncology letters · 2020
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Fumihiko OkumuraDivision of Biological Science, Graduate School of Science, Nagoya University, Aichi 464-8602, Japan okumura.fumihiko@a.mbox.nagoya-u.ac.jp z47617a@nucc.cc.agoya-u.ac.jp.
Akiko Joo-OkumuraDivision of Biological Science, Graduate School of Science, Nagoya University, Aichi 464-8602, Japan.
Keisuke ObaraDivision of Biological Science, Graduate School of Science, Nagoya University, Aichi 464-8602, Japan.
Alexander PetersenDivision of Biological Science, Graduate School of Science, Nagoya University, Aichi 464-8602, Japan.
Akihiko NishikimiDivision of Immunogenetics, Department of Immunobiology and Neuroscience, Medical Institute of Bioregulation, Kyushu University, Fukuoka 812-8582, Japan.
Yoshinori FukuiDivision of Immunogenetics, Department of Immunobiology and Neuroscience, Medical Institute of Bioregulation, Kyushu University, Fukuoka 812-8582, Japan.
Kunio NakatsukasaDivision of Biological Science, Graduate School of Science, Nagoya University, Aichi 464-8602, Japan.
Takumi KamuraDivision of Biological Science, Graduate School of Science, Nagoya University, Aichi 464-8602, Japan okumura.fumihiko@a.mbox.nagoya-u.ac.jp z47617a@nucc.cc.agoya-u.ac.jp.
Nagoya University · JPKyushu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eph receptor tyrosine kinases and their ephrin ligands are overexpressed in various human cancers, including colorectal malignancies, suggesting important roles in many aspects of cancer development and progression as well as in cellular repulsive responses. The ectodomain of EphB2 receptor is cleaved by metalloproteinases (MMPs) MMP-2/MMP-9 and released into the extracellular space after stimulation by its ligand. The remaining membrane-associated fragment is further cleaved by the presenilin-dependent γ-secretase and releases an intracellular peptide that has tyrosine kinase activity. Although the cytoplasmic fragment is degraded by the proteasome, the responsible ubiquitin ligase has not been identified. Here, we show that SOCS box-containing protein SPSB4 polyubiquitinates EphB2 cytoplasmic fragment and that SPSB4 knockdown stabilizes the cytoplasmic fragment. Importantly, SPSB4 down-regulation enhances cell repulsive responses mediated by EphB2 stimulation. Altogether, we propose that SPSB4 is a previously unidentified ubiquitin ligase regulating EphB2-dependent cell repulsive responses.

Indexed as

AnimalsCytoplasmHEK293 CellsHeLa CellsHumansLigandsMatrix MetalloproteinasesMembrane ProteinsMiceNeuronsPhosphorylationProtein BindingReceptor, EphB2Signal TransductionSuppressor of Cytokine Signaling ProteinsUbiquitinLigandsMatrix MetalloproteinasesMembrane ProteinsReceptor, EphB2Suppressor of Cytokine Signaling ProteinsUbiquitinUbiquitin-Protein Ligases

Identifiers

PMID28931592
PMCPMC5683763
OpenAlexW2754031740

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.