Evidence map›Paper›PMID 28948711›Full record

ArticleAging cell2017

Sexually divergent DNA methylation patterns with hippocampal aging.

Dustin R Masser, Niran Hadad, Hunter L Porter, Colleen A Mangold, Archana Unnikrishnan, Matthew M Ford, Cory B Giles, Constantin Georgescu, Mikhail G Dozmorov, Jonathan D Wren and 3 more

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 2 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 2 syntheses or guidelines pooled it, 75 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. TACR3 variant confers resilience to aging and Alzheimer's disease.medRxiv : the preprint server for health sciences · 2026
    Article
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  15. Genomic Instability and Epigenetic Changes during Aging.International journal of molecular sciences · 2023
    Review
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Dustin R MasserReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.
Niran HadadReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.
Hunter L PorterReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.
Colleen A MangoldDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA, USA.
Archana UnnikrishnanReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.
Matthew M FordDivision of Neuroscience, Oregon National Primate Research Center, Beaverton, OR, USA.
Cory B GilesArthritis & Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma, OK, USA.
Constantin GeorgescuArthritis & Clinical Immunology Program, Oklahoma Medical Research Foundation, Oklahoma, OK, USA.
Mikhail G DozmorovDepartment of Biostatistics, Virginia Commonwealth University School of Medicine, Richmond, VA, USA.
Jonathan D WrenOklahoma Nathan Shock Center for Aging, Oklahoma, OK, USA.
Arlan RichardsonReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.
David R StanfordReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.
Willard M FreemanReynolds Oklahoma Center on Aging, Oklahoma, OK, USA.ORCID 0000-0001-7027-999X
University of Oklahoma Health Sciences Center · USOklahoma Medical Research Foundation · USOklahoma City VA Medical Center · USOregon National Primate Research Center · USPennsylvania State University · USVirginia Commonwealth University · US

Funding

Targeted DNA Methylation and Mitochondrial Heteroplasmy CoreP30AG050911 · NIA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Matthew John Hart · 2015 to 2026
$13.9M
GEROSCIENCE TRAINING PROGRAM IN OKLAHOMAT32AG052363 · NIA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Benjamin Francis Miller, William Edmund Sonntag · 2017 to 2026
$3.6M
Cognitive Decline & Protein Expression Profiles in AgingR01AG026607 · NIA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SONNTAG, WILLIAM EDMUND · 2007 to 2011
$1.8M
INSULIN-THERAPY RESISTANT EPIGENETIC MODIFICATIONS IN DIABETIC RETINOPATHYR01EY021716 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI FREEMAN, WILLARD M · 2011 to 2014
$1.3M
Vision Science Training ProgramT32EY023202 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI CALLEGAN, MICHELLE C · 2014 to 2025
$952k
Defective mitochondrial function & genomic maintenance with diabetic retinopathyR21EY024520 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI FREEMAN, WILLARD M · 2015 to 2016
$407k
NEI NIH HHS R01 EY021716NEI NIH HHS R21 EY024520NEI NIH HHS T32 EY023202NIA NIH HHS P30 AG050911NIA NIH HHS R01 AG026607NIA NIH HHS T32 AG052363
6 · The paper itself

Abstract

DNA methylation is a central regulator of genome function, and altered methylation patterns are indicative of biological aging and mortality. Age-related cellular, biochemical, and molecular changes in the hippocampus lead to cognitive impairments and greater vulnerability to neurodegenerative disease that varies between the sexes. The role of hippocampal epigenomic changes with aging in these processes is unknown as no genome-wide analyses of age-related methylation changes have considered the factor of sex in a controlled animal model. High-depth, genome-wide bisulfite sequencing of young (3 month) and old (24 month) male and female mouse hippocampus revealed that while total genomic methylation amounts did not change with aging, specific sites in CG and non-CG (CH) contexts demonstrated age-related increases or decreases in methylation that were predominantly sexually divergent. Differential methylation with age for both CG and CH sites was enriched in intergenic and intronic regions and under-represented in promoters, CG islands, and specific enhancer regions in both sexes, suggesting that certain genomic elements are especially labile with aging, even if the exact genomic loci altered are predominantly sex-specific. Lifelong sex differences in autosomal methylation at CG and CH sites were also observed. The lack of genome-wide hypomethylation, sexually divergent aging response, and autosomal sex differences at CG sites was confirmed in human data. These data reveal sex as a previously unappreciated central factor of hippocampal epigenomic changes with aging. In total, these data demonstrate an intricate regulation of DNA methylation with aging by sex, cytosine context, genomic location, and methylation level.

Indexed as

DNA MethylationAdolescentAdultAgedAged, 80 and overAgingAnimalsFemaleHippocampusHumansMaleMiceMice, Inbred C57BLMiddle AgedSex CharacteristicsYoung AdultagingdivergenceDNA methylationepigeneticshippocampussex differences

Identifiers

PMID28948711
PMCPMC5676057
OpenAlexW2734587166

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.