Evidence map›Paper›PMID 28981775›Full record

ArticleJournal of experimental botany2017

An rbcL mRNA-binding protein is associated with C3 to C4 evolution and light-induced production of Rubisco in Flaveria.

Pradeep Yerramsetty, Erin M Agar, Won C Yim, John C Cushman, James O Berry

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pradeep YerramsettyDepartment of Biological Sciences, State University of New York, Buffalo, NY 14260, USA.
Erin M AgarDepartment of Biological Sciences, State University of New York, Buffalo, NY 14260, USA.
Won C YimDepartment of Biochemistry and Molecular Biology, University of Nevada, Reno, NV 89557, USA.
John C CushmanDepartment of Biochemistry and Molecular Biology, University of Nevada, Reno, NV 89557, USA.
James O BerryDepartment of Biological Sciences, State University of New York, Buffalo, NY 14260, USA.
University of Nevada, Reno · USUniversity at Buffalo, State University of New York · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear-encoded RLSB protein binds chloroplastic rbcL mRNA encoding the Rubisco large subunit. RLSB is highly conserved across all groups of land plants and is associated with positive post-transcriptional regulation of rbcL expression. In C3 leaves, RLSB and Rubisco occur in all chlorenchyma cell chloroplasts, while in C4 leaves these accumulate only within bundle sheath (BS) chloroplasts. RLSB's role in rbcL expression makes modification of its localization a likely prerequisite for the evolutionary restriction of Rubisco to BS cells. Taking advantage of evolutionarily conserved RLSB orthologs in several C3, C3-C4, C4-like, and C4 photosynthetic types within the genus Flaveria, we show that low level RLSB sequence divergence and modification to BS specificity coincided with ontogeny of Rubisco specificity and Kranz anatomy during C3 to C4 evolution. In both C3 and C4 species, Rubisco production reflected RLSB production in all cell types, tissues, and conditions examined. Co-localization occurred only in photosynthetic tissues, and both proteins were co-ordinately induced by light at post-transcriptional levels. RLSB is currently the only mRNA-binding protein to be associated with rbcL gene regulation in any plant, with variations in sequence and acquisition of cell type specificity reflecting the progression of C4 evolution within the genus Flaveria.

Indexed as

Biological EvolutionFlaveriaLightPhotosynthesisPhylogenyPlant LeavesPlant ProteinsRibulose-Bisphosphate CarboxylaseRNA-Binding ProteinsRNA, MessengerPlant ProteinsRibulose-Bisphosphate CarboxylaseRNA-Binding ProteinsRNA, MessengerCell type specificitylight regulationnuclear-encoded mRNA-binding proteinphylogenyplastid-encoded rbcL genepost-transcriptional controlprotein synthesisRLSB and C4 evolutionRubisco regulationtissue specificity

Identifiers

PMID28981775
PMCPMC5853808
OpenAlexW2745023413

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.