Evidence map›Paper›PMID 28982739›Full record

Trial reportGut2018

Discovery of methylated circulating DNA biomarkers for comprehensive non-invasive monitoring of treatment response in metastatic colorectal cancer.

Ludovic Barault, Alessio Amatu, Giulia Siravegna, Agostino Ponzetti, Sebastian Moran, Andrea Cassingena, Benedetta Mussolin, Chiara Falcomatà, Alexandra M Binder, Carmen Cristiano and 18 more

2 registry-linked trialsOpen access · greenAbstract readClinical Trial
In one paragraph

Trial report in Gut, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 142 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed, 2 pooled it
7.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04943406 unknown statusnot on this mapstarted 2020, after this paper: background citation

The Prognostic Performance of Liquid Biopsy in Peritoneal Lavage and Plasma of Patients With Locally Advanced Gastric Cancer (LIQUID Study)

TypeobservationalSponsorFondazione IRCCS Istituto Nazionale dei Tumori, MilanoRan2020 to 2025Enrolled150ConditionsGastric Cancer, Gastric Adenocarcinoma
NCT05031975 phase2unknown statusnot on this mapstarted 2022, after this paper: background citation

Temozolomide and Irinotecan Consolidation in Patients With MGMT Silenced, Microsatellite Stable Colorectal Cancer With Persistence of Minimal Residual Disease in Liquid Biopsy After Standard Adjuvant Chemotherapy: the ERASE-TMZ Study

TypeinterventionalSponsorFondazione IRCCS Istituto Nazionale dei Tumori, MilanoRan2022 to 2024Enrolled35ConditionsColorectal CancerArmsIrinotecan, Temozolomide
3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 2 syntheses or guidelines pooled it, 232 citations in OpenAlex.

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  18. Noninvasive Multicancer Detection Using DNA Hypomethylation of LINE-1 Retrotransposons.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
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82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 12 institutions in 3 countries.

Ludovic BaraultDepartment of Oncology, University of Torino, Torino, Italy.ORCID 0000-0001-5227-5047
Alessio AmatuNiguarda Cancer Center, Grande Ospedale Metropolitano Niguarda, Milan, Italy.
Giulia SiravegnaDepartment of Oncology, University of Torino, Torino, Italy.
Agostino PonzettiColorectal Cancer Unit, Medical Oncology Division 1, AOU Città della Salute e della Scienza, San Giovanni Battista Hospital, Turin, Italy.
Sebastian MoranCancer Epigenetics and Biology Program, Bellvitge Biomedical Research Institute, L'Hospitalet, Barcelona, Spain.
Andrea CassingenaNiguarda Cancer Center, Grande Ospedale Metropolitano Niguarda, Milan, Italy.
Benedetta MussolinCandiolo Cancer Institute-FPO, IRCCS, Candiolo, Italy.
Chiara FalcomatàDepartment of Oncology, University of Torino, Torino, Italy.
Alexandra M BinderDepartment of Epidemiology, Fielding School of Public Health, University of California, Los Angeles, California, USA.
Carmen CristianoColorectal Cancer Unit, Medical Oncology Division 1, AOU Città della Salute e della Scienza, San Giovanni Battista Hospital, Turin, Italy.
Daniele OddoDepartment of Oncology, University of Torino, Torino, Italy.
Simonetta GuarreraDepartment of Medical Sciences, Italian Institute for Genomic Medicine - IIGM/HuGeF, University of Torino, Torino, Italy.
Carlotta CancelliereCandiolo Cancer Institute-FPO, IRCCS, Candiolo, Italy.
Sara BustreoColorectal Cancer Unit, Medical Oncology Division 1, AOU Città della Salute e della Scienza, San Giovanni Battista Hospital, Turin, Italy.
Katia BencardinoNiguarda Cancer Center, Grande Ospedale Metropolitano Niguarda, Milan, Italy.
Sean MadenClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Alice VanzatiFIRC Institute of Molecular Oncology (IFOM), Milano, Italy.
Patrizia ZavattariDepartment of Biomedical Sciences, Unit of Biology and Genetics, University of Cagliari, Cagliari, Italy.ORCID 0000-0002-0481-092X
Giuseppe MatulloDepartment of Medical Sciences, Italian Institute for Genomic Medicine - IIGM/HuGeF, University of Torino, Torino, Italy.
Mauro TruiniNiguarda Cancer Center, Grande Ospedale Metropolitano Niguarda, Milan, Italy.
William M GradyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Patrizia RaccaColorectal Cancer Unit, Medical Oncology Division 1, AOU Città della Salute e della Scienza, San Giovanni Battista Hospital, Turin, Italy.
Karin B MichelsDepartment of Epidemiology, Fielding School of Public Health, University of California, Los Angeles, California, USA.
Salvatore SienaNiguarda Cancer Center, Grande Ospedale Metropolitano Niguarda, Milan, Italy.
Manel EstellerCancer Epigenetics and Biology Program, Bellvitge Biomedical Research Institute, L'Hospitalet, Barcelona, Spain.
Alberto BardelliDepartment of Oncology, University of Torino, Torino, Italy.
Andrea Sartore-Bianchi *Niguarda Cancer Center, Grande Ospedale Metropolitano Niguarda, Milan, Italy.
Federica Di Nicolantonio *Department of Oncology, University of Torino, Torino, Italy.ORCID 0000-0001-9618-2010
Candiolo Cancer Institute · ITAzienda Socio Sanitaria Territoriale Grande Ospedale Metropolitano Niguarda · ITAzienda Ospedaliero Universitaria San Giovanni Battista · ITIFOM · ITItalian institute for Genomic Medicine · ITUniversity of California, Los Angeles · USBellvitge University Hospital · ESFred Hutch Cancer Center · USInstitució Catalana de Recerca i Estudis Avançats · ESUniversity of Cagliari · ITUniversity of Milan · ITUniversity of Washington · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Justine Yang Bruce · 1985 to 2026
$142.6M
Training in Cancer Biology Training GrantT32CA009135 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI SUGDEN, WILLIAM M. · 1985 to 2024
$10.4M
Identify and validate novel epigenetic molecular markers for colorectal neoplasmU01CA152756 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY, GUDA, KISHORE · 2010 to 2021
$6.7M
Discovery and verification of novel biomarkers of colorectal cancer recurrenceR01CA189184 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI LI, CHRISTOPHER I, ULRICH, CORNELIA M · 2015 to 2020
$5.6M
(PQC1) Accelerated biological aging and colon polyp to cancer progressionR01CA194663 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY · 2015 to 2018
$1.6M
NCI NIH HHS P30 CA014520NCI NIH HHS P30 CA015704NCI NIH HHS R01 CA189184NCI NIH HHS R01 CA194663NCI NIH HHS U01 CA152756
6 · The paper itself

Abstract

objectiveMutations in cell-free circulating DNA (cfDNA) have been studied for tracking disease relapse in colorectal cancer (CRC). This approach requires personalised assay design due to the lack of universally mutated genes. In contrast, early methylation alterations are restricted to defined genomic loci allowing comprehensive assay design for population studies. Our objective was to identify cancer-specific methylated biomarkers which could be measured longitudinally in cfDNA (liquid biopsy) to monitor therapeutic outcome in patients with metastatic CRC (mCRC).

designGenome-wide methylation microarrays of CRC cell lines (n=149) identified five cancer-specific methylated loci (

resultsMethylation in at least one marker was detected in all tumour tissue samples and in 156 mCRC patient cfDNA samples (85.7%). Plasma marker prevalence was 71.4% for

conclusionThis five-gene methylation panel can be used to circumvent the absence of patient-specific mutations for monitoring tumour burden dynamics in liquid biopsy under different therapeutic regimens. This method might be proposed for assessing pharmacodynamics in clinical trials or when conventional imaging has limitations.

Indexed as

AdultAgedAntineoplastic AgentsBiomarkers, TumorCell-Free Nucleic AcidsCell Line, TumorColorectal NeoplasmsDNA MethylationDrug MonitoringFemaleHumansLongitudinal StudiesMaleMiddle AgedMutationOligonucleotide Array Sequence AnalysisAntineoplastic AgentsBiomarkers, TumorCell-Free Nucleic Acidschemotherapycolorectal cancermethylationscreeningtumour markers

Identifiers

PMID28982739
PMCPMC5897187
OpenAlexW2760986701

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.