Evidence map›Paper›PMID 29160016›Full record

ReviewChemMedChem2018

Synthetic Oligosaccharide Libraries and Microarray Technology: A Powerful Combination for the Success of Current Glycosaminoglycan Interactomics.

Vitor H Pomin, Xu Wang

Open access · greenAbstract readReview
In one paragraph

Review in ChemMedChem, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. A Systems View of the Heparan Sulfate Interactome.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
    Review
  5. Glycosaminoglycan-Protein Interactions: The First Draft of the Glycosaminoglycan Interactome.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
    Review
  6. Glycosaminoglycans.Advances in experimental medicine and biology · 2021
    Article
  7. Review
  8. Review
  9. Article
  10. Role of Chondroitin Sulfation Following Spinal Cord Injury.Frontiers in cellular neuroscience · 2020
    Review
  11. Galactosaminoglycans: Medical Applications and Drawbacks.Molecules (Basel, Switzerland) · 2019
    Review
  12. Review
  13. Perspective on computational simulations of glycosaminoglycans.Wiley interdisciplinary reviews. Computational molecular science
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Vitor H PominProgram of Glycobiology, Institute of Medical Biochemistry Leopoldo de Meis and University Hospital Clementino Fraga Filho, Federal University of Rio de Janeiro, Rio de Janeiro, 21941-913, Brazil.
Xu WangSchool of Molecular Sciences, Arizona State University, Tempe, AZ, 85287, USA.
Arizona State University · USUniversidade Federal do Rio de Janeiro · BR

Funding

Interactions of pleiotrophin with receptor type protein tyrosine phosphataseR01GM118518 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WANG, XU · 2017 to 2021
$1.6M
Sequencing Glycosaminoglycans using Recognition Tunneling NanoporesU01CA221235 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WANG, XU · 2017 to 2019
$1.3M
NCI NIH HHS U01 CA221235NIGMS NIH HHS R01 GM118518
6 · The paper itself

Abstract

Glycosaminoglycans (GAGs) are extracellular matrix and/or cell-surface sulfated glycans crucial to the regulation of various signaling proteins, the functions of which are essential in many pathophysiological systems. Because structural heterogeneity is high in GAG chains and purification is difficult, the use of structurally defined GAG oligosaccharides from natural sources as molecular models in both biophysical and pharmacological assays is limited. To overcome this obstacle, GAG-like oligosaccharides of well-defined structures are currently being synthesized by chemical and/or enzymatic means in many research groups around the world. These synthetic GAG oligosaccharides serve as useful molecular tools in studies of GAG-protein interactions. In this review, besides discussing the commonest routes used for the synthesis of GAG oligosaccharides, we also survey some libraries of these synthetic models currently available for research and discuss their activities in interaction studies with functional proteins, especially through the microarray approach.

Indexed as

Carbohydrate SequenceGlycomicsGlycosaminoglycansHumansMicroarray AnalysisOligosaccharidesProtein BindingProteinsProteomicsSmall Molecule LibrariesGlycosaminoglycansOligosaccharidesProteinsSmall Molecule Librariesde novo synthesisenzymatic synthesisglycosaminoglycansinteractomemicroarraysoligosaccharides

Identifiers

PMID29160016
PMCPMC5895483
OpenAlexW2800314213

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.