Evidence map›Paper›PMID 29226015›Full record

ArticleJournal of clinical & cellular immunology2017

Conserved HIV Epitopes for an Effective HIV Vaccine.

Bikash Sahay, Cuong Q Nguyen, Janet K Yamamoto

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical & cellular immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Functional Profile of CD8Frontiers in immunology · 2022
    Article
  6. Review
  7. Article
  8. A facile method of mapping HIV-1 neutralizing epitopes using chemically masked cysteines and deep sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Antigenic Variability.Frontiers in immunology · 2020
    Article
  10. TCR-like antibodies in cancer immunotherapy.Journal of hematology & oncology · 2019
    Review
  11. Article
  12. Epitope-based vaccine as a universal vaccination strategy againstJournal of advanced veterinary and animal research · 2019
    Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Viral-Induced Enhanced Disease Illness.Frontiers in microbiology · 2018
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Bikash SahayDepartment of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, P.O. Box 110880, Gainesville, FL 32611-0880, USA.
Cuong Q NguyenDepartment of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, P.O. Box 110880, Gainesville, FL 32611-0880, USA.
Janet K YamamotoDepartment of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, P.O. Box 110880, Gainesville, FL 32611-0880, USA.
University of Florida · US

Funding

HIV/FIV-cat model: a model to identify vaccine epitopesR01AI065276 · NIAID · UNIVERSITY OF FLORIDA · PI YAMAMOTO, JANET K. · 2006 to 2008
$1.1M
Massive analysis of paired TCR chains of TH17 cells in Sjogrens syndrome usingR21DE023433 · NIDCR · UNIVERSITY OF FLORIDA · PI NGUYEN, CUONG Q · 2014 to 2015
$393k
Development of single-cell metabolomics to dissect cellular heterogeneity ofimmune cellsR03AI122182 · NIAID · UNIVERSITY OF FLORIDA · PI NGUYEN, CUONG Q · 2016 to 2017
$150k
NIAID NIH HHS R01 AI065276NIAID NIH HHS R03 AI122182NIDCR NIH HHS R21 DE023433
6 · The paper itself

Abstract

Despite major advances in antiretroviral therapy against HIV-1, an effective HIV vaccine is urgently required to reduce the number of new cases of HIV infections in the world. Vaccines are the ultimate tool in the medical arsenal to control and prevent the spread of infectious diseases such as HIV/AIDS. Several failed phase-IIb to -III clinical vaccine trials against HIV-1 in the past generated a plethora of information that could be used for better designing of an effective HIV vaccine in the future. Most of the tested vaccine candidates produced strong humoral responses against the HIV proteins; however, failed to protect due to: 1) the low levels and the narrow breadth of the HIV-1 neutralizing antibodies and the HIV-specific antibody-dependent Fc-mediated effector activities, 2) the low levels and the poor quality of the anti-HIV T-cell responses, and 3) the excessive responses to immunodominant non-protective HIV epitopes, which in some cases blocked the protective immunity and/or enhanced HIV infection. The B-cell epitopes on HIV for producing broadly neutralizing antibodies (bNAbs) against HIV have been extensively characterized, and the next step is to develop bNAb epitope immunogen for HIV vaccine. The bNAb epitopes are often conformational epitopes and therefore more difficult to construct as vaccine immunogen and likely to include immunodominant non-protective HIV epitopes. In comparison, T-cell epitopes are short linear peptides which are easier to construct into vaccine immunogen free of immunodominant non-protective epitopes. However, its difficulty lies in identifying the T-cell epitopes conserved among HIV subtypes and induce long-lasting, potent polyfunctional T-cell and cytotoxic T lymphocyte (CTL) activities against HIV. In addition, these protective T-cell epitopes must be recognized by the HLA prevalent in the country(s) targeted for the vaccine trial. In conclusion, extending from the findings from previous vaccine trials, future vaccines should combine both T- and B-cell epitopes as vaccine immunogen to induce multitude of broad and potent immune effector activities required for sterilizing protection against global HIV subtypes.

Indexed as

B-cell epitopesHIV vaccineT-cell epitopesVaccine epitopes

Identifiers

PMID29226015
PMCPMC5719888
OpenAlexW2754478331

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.