Evidence map›Paper›PMID 29246203›Full record

ArticleBMC cancer2017

Comprehensive analysis of differentially expressed genes associated with PLK1 in bladder cancer.

Zhe Zhang, Guojun Zhang, Zhipeng Gao, Shiguang Li, Zeliang Li, Jianbin Bi, Xiankui Liu, Zhenhua Li, Chuize Kong

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
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  12. Traps and trumps from adjacent-to-tumor samples in gastric cancer research.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2018
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  14. The prognostic significance of FBXO2 expression in colorectal cancer.International journal of clinical and experimental pathology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Zhe ZhangDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Guojun ZhangDepartment of Hematology, Shengjing Hospital of China Medical University, 39 Huaxiang Road, Tiexi, Shenyang, Liaoning, 110022, China.
Zhipeng GaoDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Shiguang LiDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Zeliang LiDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Jianbin BiDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Xiankui LiuDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Zhenhua LiDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China.
Chuize KongDepartment of Urology, First Hospital of China Medical University, 155 North Nanjing Street, Heping, Shenyang, Liaoning, 110001, China. kongchuize_cmu@sina.cn.
China Medical University · CNFirst Hospital of China Medical University · CN

Funding

National Natural Science Foundation of China 81202000National Natural Science Foundation of China 81372723Natural Science Foundation of Liaoning Province 2013021066Shenyang City Project of Key Laboratory F13-293-1-00
6 · The paper itself

Abstract

backgroundThe significance of PLK1 (polo-like kinase 1) has become increasingly essential as both a biomarker and a target for cancer treatment. Here, we aimed to determine the downstream genes of PLK1 and their effects on the carcinogenesis and progression of bladder cancer.

methodsSpecific siRNA was utilized to silence the target gene expression. The cell proliferation, invasion and migration of bladder cancer cells by MTT assay, BrdU assay and transwell assay. The differential expression genes were identified using Affymetrix HTA2.0 Array. The KEGG, GO and STRING analysis were used to analyze the signaling pathway and protein-protein interaction. Spearman analysis was used to analyze the correlation between protein and protein, between protein and clincopathologic characteristics.

resultsPLK1 siRNA hindered the proliferation, invasion and migration of bladder cancer cells, as determined by the MTT, BrdU and transwell assays. A total of 561 differentially expressed genes were identified using an Affymetrix HTA2.0 Array in PLK1 knockdown T24 cells. According to KEGG, GO and STRING analysis, five key genes (BUB1B, CCNB1, CDC25A, FBXO5, NDC80) were determined to be involved in cell proliferation, invasion and migration. PLK1 knockdown decreased BUB1B, CCNB1, CDC25A and NDC80 expressions but increased FBXO5 expression. BUB1B, CCNB1, CDC25A and NDC80 were positively correlated with cell proliferation, invasion, migration and PLK1 expression in tissues, but FBXO5 was negatively correlated with each of those factors. The results showed that the five genes expressions were significantly correlation with the PLK1 expression in normal bladder tissues and bladder cancer tissues. Four of them (BUB1B, CCNB1, CDC25A, NDC80) were obviously positive correlations with pT stage and metastasis. But FBXO5 was negative correlated with pT stage and metastasis. Furthermore, significant correlations were found between CCNB1 or CDC25A or NDC80 and histological grade; between BUB1B or NDC80 and recurrence.

conclusionFive downstream genes of PLK1 were associated with the regulation of cell proliferation, invasion and migration in bladder cancer. Furthermore, these genes may play important roles in bladder cancer and become important biomarkers and targets for cancer treatment.

Indexed as

Gene Expression Regulation, NeoplasticApoptosisCarcinogenesisCell Cycle ProteinsCell Line, TumorCell MovementCell ProliferationDisease ProgressionGene Expression ProfilingGene Knockdown TechniquesHumansNeoplasm InvasivenessNeoplasm Recurrence, LocalOligonucleotide Array Sequence AnalysisPolo-Like Kinase 1Protein Interaction MapsCell Cycle ProteinsPolo-Like Kinase 1Protein Serine-Threonine KinasesProto-Oncogene ProteinsRNA, Small InterferingBladder cancerBUB1BCCNB1CDC25AFBXO5GoKEGGNDC80PLK1

Identifiers

PMID29246203
PMCPMC5732388
OpenAlexW2773294545

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.