Evidence map›Paper›PMID 29278764›Full record

ArticleMagnetic resonance imaging2018

Robust and efficient pharmacokinetic parameter non-linear least squares estimation for dynamic contrast enhanced MRI of the prostate.

Soudabeh Kargar, Eric A Borisch, Adam T Froemming, Akira Kawashima, Lance A Mynderse, Eric G Stinson, Joshua D Trzasko, Stephen J Riederer

Abstract read
In one paragraph

Article in Magnetic resonance imaging, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Soudabeh KargarBiomedical Engineering and Physiology Program, Mayo Graduate School, Rochester, MN, United States; Department of Radiology, Mayo Clinic, Rochester, MN, United States.
Eric A BorischDepartment of Radiology, Mayo Clinic, Rochester, MN, United States.
Adam T FroemmingDepartment of Radiology, Mayo Clinic, Rochester, MN, United States.
Akira KawashimaDepartment of Radiology, Mayo Clinic, Scottsdale, AZ, United States.
Lance A MynderseDepartment of Urology, Mayo Clinic, Rochester, MN, United States.
Eric G StinsonDepartment of Radiology, Mayo Clinic, Rochester, MN, United States.
Joshua D TrzaskoDepartment of Radiology, Mayo Clinic, Rochester, MN, United States.
Stephen J RiedererBiomedical Engineering and Physiology Program, Mayo Graduate School, Rochester, MN, United States; Department of Radiology, Mayo Clinic, Rochester, MN, United States. Electronic address: riederer@mayo.edu.

Funding

Modified Elliptical Centric View Orders for Improved Real-Time MRAR01EB000212 · NIBIB · MAYO CLINIC ROCHESTER · PI RIEDERER, STEPHEN J · 2002 to 2015
$4.1M
EXTRAMURAL RES FACIL IMPROVEMENT PROG: POLYCYSTIC KIDNEY DISEASE, RENAL STUDIES,C06RR018898 · NCRR · MAYO CLINIC · PI BURNETT, JOHN C · 2004 to 2004
$2.3M
NCRR NIH HHS C06 RR018898NIBIB NIH HHS R01 EB000212
6 · The paper itself

Abstract

purposeTo describe an efficient numerical optimization technique using non-linear least squares to estimate perfusion parameters for the Tofts and extended Tofts models from dynamic contrast enhanced (DCE) MRI data and apply the technique to prostate cancer.

methodsParameters were estimated by fitting the two Tofts-based perfusion models to the acquired data via non-linear least squares. We apply Variable Projection (VP) to convert the fitting problem from a multi-dimensional to a one-dimensional line search to improve computational efficiency and robustness. Using simulation and DCE-MRI studies in twenty patients with suspected prostate cancer, the VP-based solver was compared against the traditional Levenberg-Marquardt (LM) strategy for accuracy, noise amplification, robustness to converge, and computation time.

resultsThe simulation demonstrated that VP and LM were both accurate in that the medians closely matched assumed values across typical signal to noise ratio (SNR) levels for both Tofts models. VP and LM showed similar noise sensitivity. Studies using the patient data showed that the VP method reliably converged and matched results from LM with approximate 3× and 2× reductions in computation time for the standard (two-parameter) and extended (three-parameter) Tofts models. While LM failed to converge in 14% of the patient data, VP converged in the ideal 100%.

conclusionThe VP-based method for non-linear least squares estimation of perfusion parameters for prostate MRI is equivalent in accuracy and robustness to noise, while being more reliably (100%) convergent and computationally about 3× (TM) and 2× (ETM) faster than the LM-based method.

Indexed as

AgedComputer SimulationContrast MediaHumansImage EnhancementLeast-Squares AnalysisMagnetic Resonance ImagingMaleMiddle AgedProstateProstatic NeoplasmsReproducibility of ResultsContrast MediaDynamic-contrast-enhanced magnetic resonance imagingMulti-parametric magnetic resonance imagingPerfusionPharmacokinetic modelingProstate cancer

Identifiers

PMID29278764
PMCPMC5889971

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.