Evidence map›Paper›PMID 29348408›Full record

ArticleScientific reports2018

NIPBL

Jason A Mills, Pamela S Herrera, Maninder Kaur, Lanfranco Leo, Deborah McEldrew, Jesus A Tintos-Hernandez, Ramakrishnan Rajagopalan, Alyssa Gagne, Zhe Zhang, Xilma R Ortiz-Gonzalez and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Genes · 2026
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Compensation of gene dosage on the mammalian X.Development (Cambridge, England) · 2024
    Review
  10. Review
  11. Article
  12. Article
  13. DecreasingScience advances · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Epigenetics and Heart Development.Frontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jason A MillsDivision of Human Genetics, The Department of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA. millsja@pennmedicine.upenn.edu.
Pamela S HerreraDivision of Human Genetics, The Department of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Maninder KaurDivision of Human Genetics, The Department of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Lanfranco LeoKirby Center for Molecular Ophthalmology and Center for Advanced Retinal and Ocular Therapeutics (CAROT), Scheie Eye Institute, The University of Pennsylvania, Philadelphia, Pennsylvania, 19104, USA.
Deborah McEldrewDivision of Genomic Diagnostics, Department of Pathology and Laboratory Medicine, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Jesus A Tintos-HernandezDivision of Neurology, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Ramakrishnan RajagopalanDivision of Genomic Diagnostics, Department of Pathology and Laboratory Medicine, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Alyssa GagneCenter for Cellular and Molecular Therapeutics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Zhe ZhangCenter for Biomedical Health Informatics (CBHi), The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19014, USA.
Xilma R Ortiz-GonzalezDivision of Neurology, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA.
Ian D KrantzDivision of Human Genetics, The Department of Pediatrics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, 19104, USA. Krantz@email.chop.edu.
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · USPenn Presbyterian Medical Center · US

Funding

Progenitor Cell Biology Consortium Administrative Coordinating CenterU01HL099997 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI TERRIN, MICHAEL L · 2009 to 2015
$29.9M
VERTEBRATE ANIMAL MODELS OF CORNELIA DE LANGE SYNDROMEP01HD052860 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI DORSETT, DALE L · 2006 to 2015
$11.2M
Training Program in Neurodevelopmental DisabilitiesT32NS007413 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI AMELIA J EISCH, ERIC D MARSH · 1998 to 2026
$8.9M
The Intellectual and Developmental Disabilities Research Center at CHOP/PennU54HD086984 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI ABEL, EDWIN TED G. · 2016 to 2020
$6.3M
NHLBI NIH HHS U01 HL099997NICHD NIH HHS P01 HD052860NICHD NIH HHS U54 HD086984NINDS NIH HHS T32 NS007413
6 · The paper itself

Abstract

Cornelia de Lange syndrome (CdLS) is a complex disorder with multiple structural and developmental defects caused by mutations in structural and regulatory proteins involved in the cohesin complex. NIPBL, a cohesin regulatory protein, has been identified as a critical protein responsible for the orchestration of transcriptomic regulatory networks necessary for embryonic development. Mutations in NIPBL are responsible for the majority of cases of CdLS. Through RNA-sequencing of human induced pluripotent stem cells and in vitro-derived cardiomyocytes, we identified hundreds of mRNAs, pseudogenes, and non-coding RNAs with altered expression in NIPBL

Indexed as

Gene Expression RegulationHaploinsufficiencyTranscriptomeBiomarkersCell Cycle ProteinsCell DifferentiationComputational BiologyDe Lange SyndromeGene Expression ProfilingGenetic Predisposition to DiseaseGenotypeHeart Defects, CongenitalHumansInduced Pluripotent Stem CellsMyoblasts, CardiacMyocytes, CardiacBiomarkersCell Cycle ProteinsNIPBL protein, humanProteins

Identifiers

PMID29348408
PMCPMC5773608
OpenAlexW2782929997

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.