Evidence map›Paper›PMID 29381339›Full record

ArticleBiochemistry2018

Structure and Enzymatic Properties of an Unusual Cysteine Tryptophylquinone-Dependent Glycine Oxidase from Pseudoalteromonas luteoviolacea.

Andres Andreo-Vidal, Kyle J Mamounis, Esha Sehanobish, Dante Avalos, Jonatan Cristian Campillo-Brocal, Antonio Sanchez-Amat, Erik T Yukl, Victor L Davidson

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Andres Andreo-VidalDepartment of Genetics and Microbiology, University of Murcia , Murcia 30100, Spain.
Kyle J MamounisBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida , Orlando, Florida 32827, United States.
Esha SehanobishBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida , Orlando, Florida 32827, United States.
Dante AvalosDepartment of Chemistry and Biochemistry, New Mexico State University , Las Cruces, New Mexico 88003, United States.
Jonatan Cristian Campillo-BrocalDepartment of Genetics and Microbiology, University of Murcia , Murcia 30100, Spain.
Antonio Sanchez-AmatDepartment of Genetics and Microbiology, University of Murcia , Murcia 30100, Spain.ORCID 0000-0001-8597-9235
Erik T YuklDepartment of Chemistry and Biochemistry, New Mexico State University , Las Cruces, New Mexico 88003, United States.
Victor L DavidsonBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida , Orlando, Florida 32827, United States.ORCID 0000-0002-1966-7302
Universidad de Murcia · ESUniversity of Central Florida · USNew Mexico State University · US

Funding

Structure Function & Biosynthesis of Respiratory EnzymesR37GM041574 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI DAVIDSON, VICTOR L · 2009 to 2018
$3.4M
NIGMS NIH HHS R37 GM041574
6 · The paper itself

Abstract

Glycine oxidase from Pseudoalteromonas luteoviolacea (PlGoxA) is a cysteine tryptophylquinone (CTQ)-dependent enzyme. Sequence analysis and phylogenetic analysis place it in a newly designated subgroup (group IID) of a recently identified family of LodA-like proteins, which are predicted to possess CTQ. The crystal structure of PlGoxA reveals that it is a homotetramer. It possesses an N-terminal domain with no close structural homologues in the Protein Data Bank. The active site is quite small because of intersubunit interactions, which may account for the observed cooperativy toward glycine. Steady-state kinetic analysis yielded the following values: k

Indexed as

Amino Acid OxidoreductasesAmino Acid SequenceCatalytic DomainCrystallography, X-RayDipeptidesGlycineIndolequinonesKineticsModels, MolecularOxidation-ReductionProtein ConformationProtein MultimerizationPseudoalteromonasSequence AlignmentAmino Acid Oxidoreductasescysteine tryptophylquinoneDipeptidesGlycineglycine oxidaseIndolequinones

Identifiers

PMID29381339
PMCPMC5886718
OpenAlexW2787489536

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.