Evidence map›Paper›PMID 29386205›Full record

ArticleJournal of the American Heart Association2018

Liver X Receptor-Binding DNA Motif Associated With Atherosclerosis-Specific DNA Methylation Profiles of

Fabiola E Tristán-Flores, Plinio Guzmán, Melany S Ortega-Kermedy, Gabriela Cruz-Torres, Carmen de la Rocha, Guillermo A Silva-Martínez, Dalia Rodríguez-Ríos, Yolanda Alvarado-Caudillo, Gloria Barbosa-Sabanero, Sergi Sayols and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal of the American Heart Association, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Epigenetics in psoriasis: perspective of DNA methylation.Molecular genetics and genomics : MGG · 2021
    Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Fabiola E Tristán-FloresDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico.
Plinio GuzmánDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico.
Melany S Ortega-KermedyDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico.
Gabriela Cruz-TorresDepartment of Medical Sciences, Division of Health Sciences, León Campus, University of Guanajuato, León, Gto, Mexico.
Carmen de la RochaDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico.
Guillermo A Silva-MartínezDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico.
Dalia Rodríguez-RíosDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico.
Yolanda Alvarado-CaudilloDepartment of Medical Sciences, Division of Health Sciences, León Campus, University of Guanajuato, León, Gto, Mexico.
Gloria Barbosa-SabaneroDepartment of Medical Sciences, Division of Health Sciences, León Campus, University of Guanajuato, León, Gto, Mexico.
Sergi SayolsInstitute of Molecular Biology gGmbH, Mainz, Germany.
Gertrud LundDepartment of Genetic Engineering, CINVESTAV Irapuato Unit, Irapuato, Gto, Mexico szaina@ugto.mx gertrud.lund@cinvestav.mx.
Silvio ZainaDepartment of Medical Sciences, Division of Health Sciences, León Campus, University of Guanajuato, León, Gto, Mexico szaina@ugto.mx gertrud.lund@cinvestav.mx.
Instituto Tecnológico Superior de Irapuato · MXUniversidad de Guanajuato · MXInstitute of Molecular Biology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe signals that determine atherosclerosis-specific DNA methylation profiles are only partially known. We previously identified a 29-bp DNA motif (differential methylation motif [DMM]) proximal to CpG islands (CGIs) that undergo demethylation in advanced human atheromas. Those data hinted that the DMM docks modifiers of DNA methylation and transcription. METHODS AND

resultsWe sought to functionally characterize the DMM. We showed that the DMM overlaps with the RNA polymerase III-binding B box of

conclusionsCollectively, the data suggest that a DMM is associated with 2 distinct methylation states: relatively low methylation of

Indexed as

Alu ElementsCpG IslandsDNA MethylationEpigenesis, GeneticNucleotide MotifsAtherosclerosisBenzoatesBenzylaminesBinding SitesGene Expression ProfilingHumansLiver X ReceptorsProtein BindingRNA, Long NoncodingTHP-1 CellsTwo-Hybrid System TechniquesBenzoatesBenzylaminesGW 3965Liver X ReceptorsRNA, Long Noncodingatherosclerosisepigeneticsgenomics

Identifiers

PMID29386205
PMCPMC5850253
OpenAlexW2791754176

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.