Evidence map›Paper›PMID 29434861›Full record

ArticleOncology letters2018

Bioinformatic analysis of gene expression profiles of pituitary gonadotroph adenomas.

Ziming Hou, Jun Yang, Gang Wang, Changjiang Wang, Hongbing Zhang

Open access · diamondAbstract read
In one paragraph

Article in Oncology letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ziming HouDepartment of Neurosurgery, Beijing Luhe Hospital, Capital Medical University, Beijing 101149, P.R. China.
Jun YangDepartment of Neurosurgery, Beijing Luhe Hospital, Capital Medical University, Beijing 101149, P.R. China.
Gang WangDepartment of Neurosurgery, Beijing Luhe Hospital, Capital Medical University, Beijing 101149, P.R. China.
Changjiang WangDepartment of Neurosurgery, Beijing Luhe Hospital, Capital Medical University, Beijing 101149, P.R. China.
Hongbing ZhangDepartment of Neurosurgery, Beijing Luhe Hospital, Capital Medical University, Beijing 101149, P.R. China.
Beijing Luhe Hospital Affiliated to Capital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of the present study was to identify genes, microRNAs (miRNAs/miRs) or pathways associated with the development of pituitary gonadotroph adenomas. The array data of GSE23207, which included 16 samples of multiple endocrine neoplasia-associated rat pituitary homozygous mutations and 5 pituitary tissue samples from healthy rats, were downloaded from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) were analyzed prior to functional enrichment analysis and protein-protein interaction (PPI) network construction. miRNAs associated with DEGs were predicted, and an miRNA-target regulatory network was constructed. A total of 187 upregulated and 370 downregulated DEGs were identified in the pituitary gonadotroph adenoma group compared with the healthy (control) group. Cyclin-dependent kinase (Cdk) 1 exhibited the highest degree in the PPI network. The upregulated DEGs were predominately enriched in 'neuroactive ligand-receptor interaction' pathway, and downregulated DEGs were mainly enriched in 'cell cycle'. The DEGs in module were predominately enriched in the 'cell cycle', whereas DEGs in module b and c were enriched in 'neuroactive ligand-receptor interaction'. miR-374, -153, -145 and -33 were identified as important miRNAs in the regulation of the DEGs. Cdk1, cyclin (Ccn) A2, Ccnb1, 'cell cycle' and 'neuroactive ligand-receptor interaction' pathways may serve important roles in the development of pituitary gonadotroph adenomas; Ccna2 and Ccnb1 may contribute to this development via an effect on the 'cell cycle' pathway. Furthermore, miR-374 and -145 may contribute to the development of pituitary gonadotroph adenomas via regulation of the expression of target genes.

Indexed as

differentially expressed genesmicroRNA-target regulatory networkmodulespituitary gonadotroph adenomasprotein-protein interaction network

Identifiers

PMID29434861
PMCPMC5776930
OpenAlexW2771825260

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.