Evidence map›Paper›PMID 29444071›Full record

ArticlePLoS genetics2018

The PHD finger protein Spp1 has distinct functions in the Set1 and the meiotic DSB formation complexes.

Céline Adam, Raphaël Guérois, Anna Citarella, Laura Verardi, Florine Adolphe, Claire Béneut, Vérane Sommermeyer, Claire Ramus, Jérôme Govin, Yohann Couté and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Chromosome architecture and homologous recombination in meiosis.Frontiers in cell and developmental biology · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Chromosome Organization in Early Meiotic Prophase.Frontiers in cell and developmental biology · 2021
    Review
  13. Article
  14. A Role forCells · 2020
    Article
  15. Review
  16. Article
  17. Article
  18. Germline mutation ofScience advances · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Céline AdamInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.
Raphaël GuéroisInstitute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France.
Anna CitarellaInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.
Laura VerardiInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.
Florine AdolpheInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.
Claire BéneutInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.
Vérane SommermeyerInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.
Claire RamusUniv. Grenoble Alpes, CEA, INSERM, BIG-BGE, Grenoble, France.ORCID 0000-0001-5578-8120
Jérôme GovinUniv. Grenoble Alpes, CEA, INSERM, BIG-BGE, Grenoble, France.ORCID 0000-0001-5511-6965
Yohann CoutéUniv. Grenoble Alpes, CEA, INSERM, BIG-BGE, Grenoble, France.
Valérie BordeInstitut Curie, PSL Research University, CNRS, UMR3244, Paris, France.ORCID 0000-0001-6520-2461
Centre National de la Recherche Scientifique · FRInserm · FRUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone H3K4 methylation is a feature of meiotic recombination hotspots shared by many organisms including plants and mammals. Meiotic recombination is initiated by programmed double-strand break (DSB) formation that in budding yeast takes place in gene promoters and is promoted by histone H3K4 di/trimethylation. This histone modification is recognized by Spp1, a PHD finger containing protein that belongs to the conserved histone H3K4 methyltransferase Set1 complex. During meiosis, Spp1 binds H3K4me3 and interacts with a DSB protein, Mer2, to promote DSB formation close to gene promoters. How Set1 complex- and Mer2- related functions of Spp1 are connected is not clear. Here, combining genome-wide localization analyses, biochemical approaches and the use of separation of function mutants, we show that Spp1 is present within two distinct complexes in meiotic cells, the Set1 and the Mer2 complexes. Disrupting the Spp1-Set1 interaction mildly decreases H3K4me3 levels and does not affect meiotic recombination initiation. Conversely, the Spp1-Mer2 interaction is required for normal meiotic recombination initiation, but dispensable for Set1 complex-mediated histone H3K4 methylation. Finally, we provide evidence that Spp1 preserves normal H3K4me3 levels independently of the Set1 complex. We propose a model where Spp1 works in three ways to promote recombination initiation: first by depositing histone H3K4 methylation (Set1 complex), next by "reading" and protecting histone H3K4 methylation, and finally by making the link with the chromosome axis (Mer2-Spp1 complex). This work deciphers the precise roles of Spp1 in meiotic recombination and opens perspectives to study its functions in other organisms where H3K4me3 is also present at recombination hotspots.

Indexed as

DNA Breaks, Double-StrandedMeiosisDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHistonesMethylationMultiprotein ComplexesOrganisms, Genetically ModifiedPHD Zinc FingersProtein Processing, Post-TranslationalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHistonesMultiprotein ComplexesSaccharomyces cerevisiae ProteinsSET1 protein, S cerevisiaeSPP1 protein, S cerevisiae

Identifiers

PMID29444071
PMCPMC5828529
OpenAlexW2787000623

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.