Evidence map›Paper›PMID 29482039›Full record

ArticleAtherosclerosis2018

A genetic association study of carotid intima-media thickness (CIMT) and plaque in Mexican Americans and European Americans with rheumatoid arthritis.

Rector Arya, Agustin Escalante, Vidya S Farook, Jose F Restrepo, Daniel F Battafarano, Marcio Almeida, Mark Z Kos, Marcel J Fourcaudot, Srinivas Mummidi, Satish Kumar and 5 more

Abstract read
In one paragraph

Article in Atherosclerosis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Rector AryaDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA. Electronic address: rector.arya@utrgv.edu.
Agustin EscalanteDepartment of Medicine, Division of Rheumatology and Clinical Immunology, The University of Texas Health, San Antonio, TX, USA.
Vidya S FarookDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Jose F RestrepoDepartment of Medicine, Division of Rheumatology and Clinical Immunology, The University of Texas Health, San Antonio, TX, USA.
Daniel F BattafaranoSan Antonio Military Medical Center, Fort Sam Houston, TX, USA.
Marcio AlmeidaDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Mark Z KosDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Marcel J FourcaudotDivision of Diabetes, Department of Medicine, The University of Texas Health, San Antonio, TX, USA.
Srinivas MummidiDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Satish KumarDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Joanne E CurranDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Christopher P JenkinsonDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
John BlangeroDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Ravindranath DuggiralaDepartment of Human Genetics, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA; South Texas Diabetes and Obesity Institute, School of Medicine, The University of Texas Rio Grande Valley, Edinburg/Brownsville, TX, USA.
Inmaculada Del RinconDepartment of Medicine, Division of Rheumatology and Clinical Immunology, The University of Texas Health, San Antonio, TX, USA.
The University of Texas Rio Grande Valley · USThe University of Texas Health Science Center at San Antonio · USSan Antonio Military Medical Center · US

Funding

INSTITUTE FOR INTEGRATION OF MEDICINE & SCIENCE: A PARTNERSHIP TO IMPROVE HEALTHUL1RR025767 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A · 2008 to 2011
$23.8M
The Disablement Process in Rheumatoid ArthritisR01HD037151 · NICHD · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI ESCALANTE, AGUSTIN · 1999 to 2011
$4.1M
Effect of Chronic Inflammation on Atherosclerosis Outcomes in RAR01HL085742 · NHLBI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DEL RINCON, INMACULADA · 2008 to 2013
$3.6M
NCRR NIH HHS UL1 RR025767NHLBI NIH HHS R01 HL085742NICHD NIH HHS R01 HD037151
6 · The paper itself

Abstract

BACKGROUND AND

aimsLittle is known about specific genetic determinants of carotid-intima-media thickness (CIMT) and carotid plaque in subjects with rheumatoid arthritis (RA). We have used the Metabochip array to fine map and replicate loci that influence variation in these phenotypes in Mexican Americans (MAs) and European Americans (EAs).

methodsCIMT and plaque were measured using ultrasound from 700 MA and 415 EA patients with RA and we conducted association analyses with the Metabochip single nucleotide polymorphism (SNP) data using PLINK.

resultsIn MAs, 12 SNPs from 11 chromosomes and 6 SNPs from 6 chromosomes showed suggestive associations (p < 1 × 10

conclusionsWe identified novel associations between CIMT and variants in SLC17A2 and PPCDC genes, and between plaque and variants from COL4A1 and SLCA13 that may pinpoint new candidate risk loci for subclinical atherosclerosis associated with RA.

Indexed as

Carotid Intima-Media ThicknessPlaque, AtheroscleroticPolymorphism, Single NucleotideAgedArthritis, RheumatoidCarboxy-LyasesCarotid ArteriesCarotid Artery DiseasesFemaleGene Expression ProfilingGenetic Association StudiesGenetic Predisposition to DiseaseGlucose Transport Proteins, FacilitativeHumansMaleMexican AmericansCarboxy-LyasesGlucose Transport Proteins, FacilitativePhosphopantothenoyl-cysteine decarboxylaseSLC17A2 protein, humanSLC2A13 protein, humanSodium-Phosphate Cotransporter Proteins, Type ICarotid plaqueGenesGenetic associationSingle nucleotide polymorphismsSubclinical atherosclerosis

Identifiers

PMID29482039
PMCPMC5886018
OpenAlexW2769936509

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.