Evidence map›Paper›PMID 29483597›Full record

ArticleNature immunology2018

Regulation of age-associated B cells by IRF5 in systemic autoimmunity.

Michela Manni, Sanjay Gupta, Edd Ricker, Yurii Chinenov, Sung Ho Park, Man Shi, Tania Pannellini, Rolf Jessberger, Lionel B Ivashkiv, Alessandra B Pernis

Abstract read
In one paragraph

Article in Nature immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 151 citations in OpenAlex.

  1. Trial
  2. The role of IRF5 as an immune regulator.Biochemical Society transactions · 2026
    Review
  3. The SLC15A4-TASL complex is essential for lupus development in mice.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Review
  5. Review
  6. Review
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  9. ODC1 restricts meningeal B cell age-associated-like phenotype and function in multiple sclerosis: A human and experimental study.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  10. Article
  11. Article
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  13. Article
  14. The multilayered identity of B cell memory.Cellular & molecular immunology · 2026
    Review
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Michela ManniAutoimmunity and Inflammation Program, Hospital for Special Surgery, New York, NY, USA.
Sanjay GuptaAutoimmunity and Inflammation Program, Hospital for Special Surgery, New York, NY, USA.
Edd RickerGraduate Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.
Yurii ChinenovArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA.
Sung Ho ParkArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA.
Man ShiAutoimmunity and Inflammation Program, Hospital for Special Surgery, New York, NY, USA.
Tania PannelliniResearch Division and Precision Medicine Laboratory, Hospital for Special Surgery, New York, NY, USA.
Rolf JessbergerInstitute of Physiological Chemistry, Technische Universität, Dresden, Germany.
Lionel B IvashkivGraduate Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.ORCID 0000-0002-9951-0646
Alessandra B PernisAutoimmunity and Inflammation Program, Hospital for Special Surgery, New York, NY, USA. pernisa@hss.edu.ORCID 0000-0001-8259-1446
Hospital for Special Surgery · USCornell University · USTechnische Universität Dresden · DE

Funding

STEROID THERAPY AND CYTOKINES IN RHEUMATIC DISEASESR01AI046712 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 2000 to 2025
$12.5M
Inhibition of STAT3 and inflammatory cytokine productionR01AI044938 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 2000 to 2025
$9.2M
Novel signaling pathways in lupus pathogenesisR01AR064883 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI PERNIS, ALESSANDRA B · 2015 to 2019
$1.9M
Regulatory Mechanisms Controlling TFH Responses in LupusR01AR070146 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI PERNIS, ALESSANDRA B · 2016 to 2020
$1.9M
Cell SorterS10OD019986 · OD · HOSPITAL FOR SPECIAL SURGERY · PI LU, THERESA T. · 2015 to 2015
$600k
Examining the Role of Rho Kinase in the Pathogenesis of ABC-DLBCLF31CA196209 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI RICKER, EDD C · 2015 to 2017
$131k
INHIBITION OF IL-6 AND STAT3 IN RHEUMATOID ARTHRITISR21AI044938 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 1999 to 1999
–
NCI NIH HHS F31 CA196209NIAID NIH HHS R01 AI044938NIAID NIH HHS R01 AI046712NIAID NIH HHS R21 AI044938NIAMS NIH HHS R01 AR064883NIAMS NIH HHS R01 AR070146NIH HHS S10 OD019986
6 · The paper itself

Abstract

Age-associated B cells (ABCs) are a subset of B cells dependent on the transcription factor T-bet that accumulate prematurely in autoimmune settings. The pathways that regulate ABCs in autoimmunity are largely unknown. SWAP-70 and DEF6 (also known as IBP or SLAT) are the only two members of the SWEF family, a unique family of Rho GTPase-regulatory proteins that control both cytoskeletal dynamics and the activity of the transcription factor IRF4. Notably, DEF6 is a newly identified human risk variant for systemic lupus erythematosus. Here we found that the lupus syndrome that developed in SWEF-deficient mice was accompanied by the accumulation of ABCs that produced autoantibodies after stimulation. ABCs from SWEF-deficient mice exhibited a distinctive transcriptome and a unique chromatin landscape characterized by enrichment for motifs bound by transcription factors of the IRF and AP-1 families and the transcription factor T-bet. Enhanced ABC formation in SWEF-deficient mice was controlled by the cytokine IL-21 and IRF5, whose variants are strongly associated with lupus. The lack of SWEF proteins led to dysregulated activity of IRF5 in response to stimulation with IL-21. These studies thus elucidate a previously unknown signaling pathway that controls ABCs in autoimmunity.

Indexed as

AnimalsAutoimmunityB-Lymphocyte SubsetsDNA-Binding ProteinsFemaleGuanine Nucleotide Exchange FactorsInterferon Regulatory FactorsLupus Erythematosus, SystemicMiceMice, Inbred C57BLMice, KnockoutMinor Histocompatibility AntigensNuclear ProteinsDef6 protein, mouseDNA-Binding ProteinsGuanine Nucleotide Exchange FactorsInterferon Regulatory FactorsIrf5 protein, mouseMinor Histocompatibility AntigensNuclear ProteinsSwap70 protein, mouse

Identifiers

PMID29483597
PMCPMC6095139
OpenAlexW2791390833

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.