Evidence map›Paper›PMID 29588380›Full record

ArticleG3 (Bethesda, Md.)2018

QTL Mapping of Genome Regions Controlling Manganese Uptake in Lentil Seed.

Duygu Ates, Secil Aldemir, Bulent Yagmur, Abdullah Kahraman, Hakan Ozkan, Albert Vandenberg, Muhammed Bahattin Tanyolac

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Duygu AtesDepartment of Bioengineering, Faculty of Engineering, Ege University, Bornova, Izmir, Turkey.
Secil AldemirDepartment of Bioengineering, Faculty of Engineering, Ege University, Bornova, Izmir, Turkey.
Bulent YagmurDepartment of Bioengineering, Faculty of Engineering, Ege University, Bornova, Izmir, Turkey.
Abdullah KahramanDepartment of Field Crops, Faculty of Agriculture, Harran University, Sanliurfa, Turkey.
Hakan OzkanDepartment of Field Crops, Faculty of Agriculture, Cukurova University, Adana, Turkey.
Albert VandenbergCrop Development Centre, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Muhammed Bahattin TanyolacDepartment of Bioengineering, Faculty of Engineering, Ege University, Bornova, Izmir, Turkey bahattin.tanyolac@ege.edu.tr.
Ege University · TRCukurova University · TRHarran University · TRUniversity of Saskatchewan · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study evaluated Mn concentration in the seeds of 120 RILs of lentil developed from the cross "CDC Redberry" × "ILL7502". Micronutrient analysis using atomic absorption spectrometry indicated mean seed manganese (Mn) concentrations ranging from 8.5 to 26.8 mg/kg, based on replicated field trials grown at three locations in Turkey in 2012 and 2013. A linkage map of lentil was constructed and consisted of seven linkage groups with 5,385 DNA markers. The total map length was 973.1 cM, with an average distance between markers of 0.18 cM. A total of 6 QTL for Mn concentration were identified using composite interval mapping (CIM). All QTL were statistically significant and explained 15.3-24.1% of the phenotypic variation, with LOD scores ranging from 3.00 to 4.42. The high-density genetic map reported in this study will increase fundamental knowledge of the genome structure of lentil, and will be the basis for the development of micronutrient-enriched lentil genotypes to support biofortification efforts.

Indexed as

Chromosome MappingGenome, PlantAnalysis of VarianceCrosses, GeneticGenetic LinkageInbreedingLens PlantManganeseQuantitative Trait LociSeedsSoilManganeseSoilDArTGenome ReportlentilmanganeseQTL mappingSNP

Identifiers

PMID29588380
PMCPMC5940135
OpenAlexW2794625477

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.