Evidence map›Paper›PMID 29668769›Full record

ArticleMemorias do Instituto Oswaldo Cruz2018

Trypanosoma cruzi transcriptome during axenic epimastigote growth curve.

Cyndia Mara Bezerra Dos Santos, Adriana Ludwig, Rafael Luis Kessler, Rita de Cássia Pontello Rampazzo, Alexandre Haruo Inoue, Marco Aurélio Krieger, Daniela Parada Pavoni, Christian Macagnan Probst

Abstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Stage-specific MCM protein expression inFrontiers in cellular and infection microbiology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. AParasitology · 2021
    Article
  10. Trypanin Disruption Affects the Motility and Infectivity of the ProtozoanFrontiers in cellular and infection microbiology · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Study ofMobile DNA · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Cyndia Mara Bezerra Dos SantosCentro Politécnico, Universidade Federal do Paraná, Curitiba, PR, Brasil.
Adriana LudwigInstituto Carlos Chagas, Fundação Oswaldo Cruz, Curitiba, PR, Brasil.
Rafael Luis KesslerInstituto Carlos Chagas, Fundação Oswaldo Cruz, Curitiba, PR, Brasil.
Rita de Cássia Pontello RampazzoInstituto de Biologia Molecular do Paraná, Curitiba, PR, Brasil.
Alexandre Haruo InoueInstituto Carlos Chagas, Fundação Oswaldo Cruz, Curitiba, PR, Brasil.
Marco Aurélio KriegerCentro Politécnico, Universidade Federal do Paraná, Curitiba, PR, Brasil.
Daniela Parada PavoniCentro Politécnico, Universidade Federal do Paraná, Curitiba, PR, Brasil.
Christian Macagnan ProbstCentro Politécnico, Universidade Federal do Paraná, Curitiba, PR, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Trypanosoma cruzi is an important protozoan parasite and the causative agent of Chagas disease. A critical step in understanding T. cruzi biology is the study of cellular and molecular features exhibited during its growth curve. OBJECTIVES We aimed to acquire a global view of the gene expression profile of T. cruzi during epimastigote growth. METHODS RNA-Seq analysis of total and polysomal/granular RNA fractions was performed along the 10 days T. cruzi epimastigote growth curve in vitro, in addition to cell viability and cell cycle analyses. We also analysed the polysome profile and investigated the presence of granular RNA by FISH and western blotting. FINDINGS We identified 1082 differentially expressed genes (DEGs), of which 220 were modulated in both fractions. According to the modulation pattern, DEGs were grouped into 12 clusters and showed enrichment of important gene ontology (GO) terms. Moreover, we showed that by the sixth day of the growth curve, polysomal content declined greatly and the RNA granules content appeared to increase, suggesting that a portion of mRNAs isolated from the sucrose gradient during late growth stages was associated with RNA granules and not only polyribosomes. Furthermore, we discuss several modulated genes possibly involved in T. cruzi growth, mainly during the stationary phase, such as genes related to cell cycle, pathogenesis, metabolic processes and RNA-binding proteins.

Indexed as

Axenic CultureBlotting, WesternLife Cycle StagesPolyribosomesSequence Analysis, RNATranscriptomeTrypanosoma cruzi

Identifiers

PMID29668769
PMCPMC5907844

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.