Evidence map›Paper›PMID 29735986›Full record

ArticleJournal of human genetics2018

Novel splice-site variant of UCHL1 in an Indian family with autosomal recessive spastic paraplegia-79.

Aneek Das Bhowmik, Siddaramappa J Patil, Dipti Vijayrao Deshpande, Venkatraman Bhat, Ashwin Dalal

Abstract readCase Reports
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In one paragraph

Article in Journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. A new variant in the UCHL1 gene supporting its implication in late-onset ataxia with optic atrophy.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Frontiers in molecular neuroscience · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Aneek Das BhowmikDiagnostics Division, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, India.ORCID http://orcid.org/0000-0003-3318-8268
Siddaramappa J PatilDepartment of Medical Genetics, Mazumdar Shaw Medical Center, Narayana Health City, Bangalore, India.
Dipti Vijayrao DeshpandeDiagnostics Division, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, India.
Venkatraman BhatDepartment of Radiology, Mazumdar-Shaw Medical Center, Narayana Health City, Bangalore, India.
Ashwin DalalDiagnostics Division, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, India. adalal@cdfd.org.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spastic Paraplegia-79 (SPG79) is an autosomal recessive type of childhood onset complicated by hereditary spastic paraplegia. SPG79 is characterized by spasticity, paraplegia, optic atrophy, cerebellar signs, and other variable clinical features. Recessive, disease causing variants in Ubiquitin C-terminal hydrolase-L1 (UCHL1) gene have been implicated as a cause for SPG79 in two families till now. In this study, we report on a third family of SPG79 with two similarly affected siblings, harboring a novel homozygous splice-site variant in the UCHL1 gene (NM_004181.4: c.459+2T>C). The variant was identified by whole-exome sequencing and validated by Sanger sequencing in the family.

Indexed as

Base SequenceChildChild, PreschoolFamilyFemaleHumansIndiaInfantMalePedigreeReproducibility of ResultsRNA Splice SitesRNA SplicingSpastic Paraplegia, HereditaryUbiquitin ThiolesteraseRNA Splice SitesUbiquitin ThiolesteraseUCHL1 protein, human

Identifiers

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.