Evidence map›Paper›PMID 29907492›Full record

ArticleSchizophrenia research2018

Polygenic risk score, genome-wide association, and gene set analyses of cognitive domain deficits in schizophrenia.

Soichiro Nakahara, Sarah Medland, Jessica A Turner, Vince D Calhoun, Kelvin O Lim, Bryon A Mueller, Juan R Bustillo, Daniel S O'Leary, Jatin G Vaidya, Sarah McEwen and 8 more

Abstract read
In one paragraph

Article in Schizophrenia research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  15. Genetic Risk Assessment in Psychiatry.Cold Spring Harbor perspectives in medicine · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Soichiro NakaharaClinical Translational Neuroscience Laboratory, Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA 92617, United States; Unit 2, Candidate Discovery Science Labs, Drug Discovery Research, Astellas Pharma Inc, 21, Miyukigaoka, Tsukuba, Ibaraki 305-8585, Japan.
Sarah MedlandPsychiatric Genetics, QIMR Berghofer Medical Research Institute, 300 Herston Road, Herston, QLD 4006, Australia.
Jessica A TurnerDepartments of Psychology and Neuroscience, Georgia State University, Atlanta, GA, United States; Mind Research Network, Albuquerque, NM 87106, United States.
Vince D CalhounDepartment of Electrical and Computer Engineering, University of New Mexico, Albuquerque, NM, United States; Departments of Psychiatry & Neuroscience, University of New Mexico, Albuquerque, NM 87131, United States; Department of Psychiatry, University of Minnesota, Minneapolis, MN 55454, United States.
Kelvin O LimDepartments of Psychiatry & Neuroscience, University of New Mexico, Albuquerque, NM 87131, United States.
Bryon A MuellerDepartment of Psychiatry, University of Minnesota, Minneapolis, MN 55454, United States.
Juan R BustilloDepartments of Psychiatry & Neuroscience, University of New Mexico, Albuquerque, NM 87131, United States.
Daniel S O'LearyDepartment of Psychiatry, University of Iowa, Iowa City, IA 52242, United States.
Jatin G VaidyaDepartment of Psychiatry, University of Iowa, Iowa City, IA 52242, United States.
Sarah McEwenDepartment of Psychiatry, University of California, San Diego, La Jolla, CA 92093, United States.
James VoyvodicBrain Imaging and Analysis Center, Duke University Medical Center, Durham, NC 27710, United States.
Aysenil BelgerDepartment of Psychiatry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, United States.
Daniel H MathalonDepartment of Psychiatry, Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA 94143, United States; Veterans Affairs San Francisco Healthcare System, San Francisco, CA 94121, United States.
Judith M FordDepartment of Psychiatry, Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA 94143, United States; Veterans Affairs San Francisco Healthcare System, San Francisco, CA 94121, United States.
Guia GuffantiDepartment of Psychiatry at Harvard Medical School and Computational Genomics Lab at McLean Hospital, Boston, United States.
Fabio MacciardiDepartment of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA 92617, United States.
Steven G PotkinDepartment of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA 92617, United States.
Theo G M van ErpClinical Translational Neuroscience Laboratory, Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA 92617, United States. Electronic address: tvanerp@uci.edu.

Funding

University of California Health Participation in the National COVID Cohort Collaborative (N3C)UL1TR001414 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M, VILAIN, ERIC J. · 2015 to 2023
$35.1M
FUNCTION BIRNU24RR021992 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI POTKIN, STEVEN G · 2006 to 2010
$25.0M
BIO-INFORMATICS RESEARCH NETWORK COORDINATING CENTER (BIRN-CC)U24RR025736 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KESSELMAN, CARL · 2009 to 2011
$15.0M
Transcranial Direct Current Stimulation for Treatment of Auditory Verbal HalluciP20GM103472 · NIGMS · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D · 2012 to 2017
$14.3M
Institute for Clinical and Translational ScienceUL1TR000153 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M · 2012 to 2015
$12.1M
Multivariate methods for identifying multitask/multimodal brain imaging biomarkersR01EB006841 · NIBIB · THE MIND RESEARCH NETWORK · PI VINCE D CALHOUN, Sergey Plis · 2007 to 2026
$9.8M
Mining the Genomewide Scan: Genetic Profiles of Structural Loss in Schizophrenia: AD/ADRD supplementR01MH094524 · NIMH · THE MIND RESEARCH NETWORK · PI CALHOUN, VINCE D, TURNER, JESS · 2012 to 2021
$6.3M
Unified multivariate data-driven solutions for static and dynamic brain connectivityR01EB020407 · NIBIB · THE MIND RESEARCH NETWORK · PI ADALI, TULAY, CALHOUN, VINCE D · 2015 to 2018
$2.7M
Biological Mechanisms of Enhanced Neuroplasticity in First-Episode SchizophreniaK01MH099431 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MCEWEN, SARAH CHRISTINE · 2012 to 2016
$829k
NCATS NIH HHS UL1 TR000153NCATS NIH HHS UL1 TR001414NCRR NIH HHS U24 RR021992NCRR NIH HHS U24 RR025736NIBIB NIH HHS R01 EB006841NIBIB NIH HHS R01 EB020407NIGMS NIH HHS P20 GM103472NIMH NIH HHS K01 MH099431NIMH NIH HHS R01 MH094524
6 · The paper itself

Abstract

This study assessed genetic contributions to six cognitive domains, identified by the MATRICS Cognitive Consensus Battery as relevant for schizophrenia, cognition-enhancing, clinical trials. Psychiatric Genomics Consortium Schizophrenia polygenic risk scores showed significant negative correlations with each cognitive domain. Genome-wide association analyses identified loci associated with attention/vigilance (rs830786 within HNF4G), verbal memory (rs67017972 near NDUFS4), and reasoning/problem solving (rs76872642 within HDAC9). Gene set analysis identified unique and shared genes across cognitive domains. These findings suggest involvement of common and unique mechanisms across cognitive domains and may contribute to the discovery of new therapeutic targets to treat cognitive deficits in schizophrenia.

Indexed as

Genetic Predisposition to DiseaseMultifactorial InheritanceSchizophrenic PsychologyAdultCognitive DysfunctionFemaleGenetic LociGenome-Wide Association StudyHumansMaleSchizophreniaGWASMCCBNeuropsychologyPRSSchizophrenia

Identifiers

PMID29907492
PMCPMC6252137

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.