Evidence map›Paper›PMID 29909277›Full record

ArticleCell systems2018

Systems Analyses Reveal Physiological Roles and Genetic Regulators of Liver Lipid Species.

Pooja Jha, Molly T McDevitt, Rahul Gupta, Pedro M Quiros, Evan G Williams, Karim Gariani, Maroun B Sleiman, Leo Diserens, Adam Jochem, Arne Ulbrich and 3 more

Abstract read
In one paragraph

Article in Cell systems, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Exercise elicits mitonuclear protein imbalance and UPRJournal of physiology and biochemistry · 2026
    Article
  2. Eigenlipids for exploring lipid biology.Journal of lipid research · 2026
    Review
  3. Article
  4. Article
  5. Frontiers in cardiovascular medicine · 2025
    Article
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  12. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Pooja JhaLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Molly T McDevittMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Rahul GuptaMorgridge Institute for Research, Madison, WI 53715, USA.
Pedro M QuirosLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Evan G WilliamsLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Karim GarianiLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Maroun B SleimanLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Leo DiserensLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Adam JochemMorgridge Institute for Research, Madison, WI 53715, USA.
Arne UlbrichDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Joshua J CoonDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA; Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Johan AuwerxLaboratory of Integrative and Systems Physiology, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland. Electronic address: admin.auwerx@epfl.ch.
David J PagliariniMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: dpagliarini@morgridge.org.

Funding

GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
TR&D 2 Metabolic Labels for Ultraplexed Protein Quantification p. 453P41GM108538 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI LI, LINGJUN · 2016 to 2025
$13.1M
Structure, Function and Regulation of the ProteomeR35GM118110 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2016 to 2025
$9.1M
Translational Systems Genetics of Mitochondria, Metabolism, and AgingR01AG043930 · NIA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI WILLIAMS, ROBERT W. · 2013 to 2017
$2.5M
Systematic functional annotation of the mitochondrial proteomeR01GM115591 · NIGMS · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI PAGLIARINI, DAVID J · 2016 to 2018
$1.1M
Identifying Biomolecular Networks Driving Metabolic Trait VariationF32GM119190 · NIGMS · SWISS FEDERAL INST OF TECH (ETH ZURICH) · PI WILLIAMS, EVAN GRAEHL · 2016 to 2018
$174k
NIA NIH HHS R01 AG043930NIGMS NIH HHS F32 GM119190NIGMS NIH HHS P41 GM108538NIGMS NIH HHS R01 GM115591NIGMS NIH HHS R35 GM118110NIGMS NIH HHS T32 GM007215
6 · The paper itself

Abstract

The genetics of individual lipid species and their relevance in disease is largely unresolved. We profiled a subset of storage, signaling, membrane, and mitochondrial liver lipids across 385 mice from 47 strains of the BXD mouse population fed chow or high-fat diet and integrated these data with complementary multi-omics datasets. We identified several lipid species and lipid clusters with specific phenotypic and molecular signatures and, in particular, cardiolipin species with signatures of healthy and fatty liver. Genetic analyses revealed quantitative trait loci for 68% of the lipids (lQTL). By multi-layered omics analyses, we show the reliability of lQTLs to uncover candidate genes that can regulate the levels of lipid species. Additionally, we identified lQTLs that mapped to genes associated with abnormal lipid metabolism in human GWASs. This work provides a foundation and resource for understanding the genetic regulation and physiological significance of lipid species.

Indexed as

AnimalsDiet, High-FatFemaleGene Expression RegulationGenome-Wide Association StudyLipid MetabolismLipidsLiverMaleMiceMice, Inbred C57BLMice, Inbred DBANon-alcoholic Fatty Liver DiseasePhenotypeQuantitative Trait LociReproducibility of ResultsLipidsBXDcardiolipinfatty livergenetic reference population, GRPgenetic variationgenome-wide association study, GWASlipidomicslipid speciesnon-alcoholic fatty liver disease, NAFLDquantitative trait locus, QTL

Identifiers

PMID29909277
PMCPMC6054463

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.