Evidence map›Paper›PMID 29913133›Full record

ArticleThe Journal of investigative dermatology2018

IRF6 and AP2A Interaction Regulates Epidermal Development.

Youssef A Kousa, Eric Fuller, Brian C Schutte

Open access · greenAbstract read
In one paragraph

Article in The Journal of investigative dermatology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Youssef A KousaBiochemistry and Molecular Biology Department, Michigan State University, East Lansing, Michigan, USA. Electronic address: YKousa@cnmc.org.
Eric FullerDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Brian C SchutteDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA. Electronic address: schutteb@msu.edu.
Michigan State University · US

Funding

Role of Irf6 in palatal epitheliumF31DE022696 · NIDCR · MICHIGAN STATE UNIVERSITY · PI KOUSA, YOUSSEF A · 2012 to 2013
$60k
NIDCR NIH HHS F31 DE022696
6 · The paper itself

Abstract

Variants in IRF6 can lead to Van der Woude syndrome and popliteal pterygium syndrome. Furthermore, genes upstream and downstream of IRF6, including GRHL3 and TP63, are also associated with orofacial clefting. Additionally, a variant in an enhancer (MCS9.7) that regulates IRF6 is associated with risk for isolated orofacial clefting. This variant (rs642961) abrogates AP2A protein binding at MCS9.7. Here, we found that AP2A protein regulates MCS9.7 enhancer activity in vivo and IRF6 protein expression in epidermal development. In addition, loss of IRF6 leads to supra-basal expression of AP2A protein. Finally, using an IRF6 allelic series, we found that either increasing or decreasing IRF6 protein expression can destabilize AP2A protein expression in vivo. These data suggest that IRF6 regulates AP2A protein level in epidermal development. Therefore, we conclude that IRF6 and TFAP2A are part of a genetic regulatory network that is critical in epithelial development, with implications for both orofacial and cutaneous tissues. Our work provides in vivo, functional data to explain the relationship between AP2A protein binding and the MCS9.7 enhancer in orofacial clefting. This work is important because the MCS9.7 enhancer element contains a variant that abrogates AP2A protein binding and increases risk for orofacial clefting worldwide.

Indexed as

Abnormalities, MultipleAdaptor Protein Complex 2Adaptor Protein Complex alpha SubunitsAllelesAnimalsCells, CulturedCleft LipCleft PalateCystsEnhancer Elements, GeneticEpidermisEye AbnormalitiesFingersGene Regulatory NetworksHumansInterferon Regulatory FactorsAdaptor Protein Complex 2adaptor protein complex 2, alpha 2 subunitAdaptor Protein Complex alpha SubunitsInterferon Regulatory FactorsIRF6 protein, humanIRF6 protein, mouse

Identifiers

PMID29913133
PMCPMC12959130
OpenAlexW2809414515

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.