Evidence map›Paper›PMID 29939309›Full record

ArticleJournal of experimental botany2018

Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms.

Lam Dai Vu, Tingting Zhu, Inge Verstraeten, Brigitte van de Cotte, International Wheat Genome Sequencing Consortium, Kris Gevaert, Ive De Smet

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Lam Dai VuGhent University, Department of Plant Biotechnology and Bioinformatics, Ghent, Belgium.
Tingting ZhuGhent University, Department of Plant Biotechnology and Bioinformatics, Ghent, Belgium.
Inge VerstraetenGhent University, Department of Plant Biotechnology and Bioinformatics, Ghent, Belgium.
Brigitte van de CotteGhent University, Department of Plant Biotechnology and Bioinformatics, Ghent, Belgium.
International Wheat Genome Sequencing Consortium
Kris GevaertDepartment of Biochemistry, Ghent University, Ghent, Belgium.
Ive De SmetGhent University, Department of Plant Biotechnology and Bioinformatics, Ghent, Belgium.
VIB-UGent Center for Plant Systems Biology · BEVIB-UGent Center for Medical Biotechnology · BEGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wheat (Triticum ssp.) is one of the most important human food sources. However, this crop is very sensitive to temperature changes. Specifically, processes during wheat leaf, flower, and seed development and photosynthesis, which all contribute to the yield of this crop, are affected by high temperature. While this has to some extent been investigated on physiological, developmental, and molecular levels, very little is known about early signalling events associated with an increase in temperature. Phosphorylation-mediated signalling mechanisms, which are quick and dynamic, are associated with plant growth and development, also under abiotic stress conditions. Therefore, we probed the impact of a short-term and mild increase in temperature on the wheat leaf and spikelet phosphoproteome. In total, 3822 (containing 5178 phosphosites) and 5581 phosphopeptides (containing 7023 phosphosites) were identified in leaf and spikelet samples, respectively. Following statistical analysis, the resulting data set provides the scientific community with a first large-scale plant phosphoproteome under the control of higher ambient temperature. This community resource on the high temperature-mediated wheat phosphoproteome will be valuable for future studies. Our analyses also revealed a core set of common proteins between leaf and spikelet, suggesting some level of conserved regulatory mechanisms. Furthermore, we observed temperature-regulated interconversion of phosphoforms, which probably impacts protein activity.

Indexed as

FlowersHot TemperaturePhosphoproteinsPlant LeavesPlant ProteinsProteomeStress, PhysiologicalTriticumPhosphoproteinsPlant ProteinsProteome

Identifiers

PMID29939309
PMCPMC6117581
OpenAlexW2952870031

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.