Evidence map›Paper›PMID 29996845›Full record

ArticleRetrovirology2018

The invariant arginine within the chromatin-binding motif regulates both nucleolar localization and chromatin binding of Foamy virus Gag.

Joris Paris, Joëlle Tobaly-Tapiero, Marie-Lou Giron, Julien Burlaud-Gaillard, Florence Buseyne, Philippe Roingeard, Pascale Lesage, Alessia Zamborlini, Ali Saïb

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  4. Protein arginine methylation in viral infection and antiviral immunity.International journal of biological sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Joris ParisCNRS UMR7212, Hôpital St Louis, Inserm U944, Institut Universitaire d'Hématologie, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Joëlle Tobaly-TapieroCNRS UMR7212, Hôpital St Louis, Inserm U944, Institut Universitaire d'Hématologie, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Marie-Lou GironCNRS UMR7212, Hôpital St Louis, Inserm U944, Institut Universitaire d'Hématologie, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Julien Burlaud-GaillardPlateforme IBiSA de Microscopie Electronique, Université François Rabelais and CHRU de Tours, Tours, France.
Florence BuseyneInstitut Pasteur, Unité d'Epidémiologie et Physiopathologie des Virus Oncogènes, Paris, France.
Philippe RoingeardPlateforme IBiSA de Microscopie Electronique, Université François Rabelais and CHRU de Tours, Tours, France.
Pascale LesageCNRS UMR7212, Hôpital St Louis, Inserm U944, Institut Universitaire d'Hématologie, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Alessia ZamborliniCNRS UMR7212, Hôpital St Louis, Inserm U944, Institut Universitaire d'Hématologie, Université Paris Diderot, Sorbonne Paris Cité, Paris, France. alessia.zamborlini@univ-paris-diderot.fr.ORCID 0000-0002-8902-1996
Ali SaïbCNRS UMR7212, Hôpital St Louis, Inserm U944, Institut Universitaire d'Hématologie, Université Paris Diderot, Sorbonne Paris Cité, Paris, France. ali.saib@univ-paris-diderot.fr.
Centre National de la Recherche Scientifique · FRUniversité de Tours · FRConservatoire National des Arts et Métiers · FR

Funding

Agence Nationale de la Recherche ANR-12-BSV3-0016Agence Nationale de la Recherche ANR-15-CE15-0008
6 · The paper itself

Abstract

backgroundNuclear localization of Gag is a property shared by many retroviruses and retrotransposons. The importance of this stage for retroviral replication is still unknown, but studies on the Rous Sarcoma virus indicate that Gag might select the viral RNA genome for packaging in the nucleus. In the case of Foamy viruses, genome encapsidation is mediated by Gag C-terminal domain (CTD), which harbors three clusters of glycine and arginine residues named GR boxes (GRI-III). In this study we investigated how PFV Gag subnuclear distribution might be regulated.

resultsWe show that the isolated GRI and GRIII boxes act as nucleolar localization signals. In contrast, both the entire Gag CTD and the isolated GRII box, which contains the chromatin-binding motif, target the nucleolus exclusively upon mutation of the evolutionary conserved arginine residue at position 540 (R540), which is a key determinant of FV Gag chromatin tethering. We also provide evidence that Gag localizes in the nucleolus during FV replication and uncovered that the viral protein interacts with and is methylated by Protein Arginine Methyltransferase 1 (PRMT1) in a manner that depends on the R540 residue. Finally, we show that PRMT1 depletion by RNA interference induces the concentration of Gag C-terminus in nucleoli.

conclusionAltogether, our findings suggest that methylation by PRMT1 might finely tune the subnuclear distribution of Gag depending on the stage of the FV replication cycle. The role of this step for viral replication remains an open question.

Indexed as

Amino Acid MotifsArginineProtein Interaction Domains and MotifsAmino Acid SequenceCell NucleusChromatinEvolution, MolecularGene Products, gagHumansNuclear Localization SignalsProtein-Arginine N-MethyltransferasesProtein BindingProtein Processing, Post-TranslationalProtein TransportRepressor ProteinsRetroviridae InfectionsArginineChromatinGene Products, gagNuclear Localization SignalsPRMT1 protein, humanProtein-Arginine N-MethyltransferasesRepressor ProteinsChromatin-bindingFoamy virusGagMethylationNuclear traffickingNucleolusPost-translational modificationPRMT

Identifiers

PMID29996845
PMCPMC6042332
OpenAlexW2871604371

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.