Evidence map›Paper›PMID 30011129›Full record

ArticleMolecular plant pathology2018

RaxM regulates the AvrXa21 (RaxX)-mediated immune response.

Chunli Xu, Yaxin Wang, Shiyao Liu, Qingbiao Xie, Na He, Chenyi Shi, Xiaolei Niu, Chaozu He, Chunxia Li, Jun Tao

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Chunli XuHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Yaxin WangInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan, 570228, China.
Shiyao LiuHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Qingbiao XieHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Na HeHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Chenyi ShiInstitute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan, 570228, China.
Xiaolei NiuHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Chaozu HeHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Chunxia LiHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Jun TaoHainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, Hainan, 570228, China.
Hainan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xanthomonas oryzae pv. oryzae (Xoo) is the causal agent of rice bacterial blight disease, which causes a reduction in rice production. The interaction between Xoo and rice is a model for the study of the gene-for-gene hypothesis, in which a resistance (R) gene encoding a product interacts with an effector molecule encoded by a corresponding bacterial avirulence (avr) gene. Rice XA21 functions as a plant innate immune receptor (R protein) and recognizes the avirulence protein (RaxX) of Xoo to induce the immune response and cope with pathogen attack. The sulphuration of RaxX by the tyrosine sulphotransferase RaxST is essential to its activity. The expression of raxST is regulated by the RaxH/RaxR and phoP/phoQ two-component systems. However, the regulation of raxX expression remains unclear. Here, we showed that a gene (raxM) encodes a small protein, which functions as a regulator of raxX expression. raxX and raxM are located upstream of raxST. Transcriptional analysis indicates that raxX and raxM are separately transcribed and the promoter of raxX is located at the raxM coding region. The RaxM protein regulates its own and raxX expression, and is required for the XA21-mediated immunity response. Therefore, we identified a regulator of raxX expression and of the Xoo-rice interaction. Our findings suggest that RaxX is not only regulated at the post-translational level, but also at the transcriptional level.

Indexed as

Plant ImmunityBacterial ProteinsGene Expression Regulation, BacterialGenes, BacterialOpen Reading FramesOryzaPlant DiseasesPromoter Regions, GeneticXanthomonasBacterial Proteinsimmune responseRaxMRaxXregulationXA21Xanthomonas oryzae pv. oryzae (Xoo)

Identifiers

PMID30011129
PMCPMC6638069
OpenAlexW2884189075

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.