Evidence map›Paper›PMID 30012406›Full record

ArticleChemistry and physics of lipids2018

A simple supported tubulated bilayer system for evaluating protein-mediated membrane remodeling.

Noah A Schenk, Peter J Dahl, Michael G Hanna, Anjon Audhya, Gregory G Tall, Jefferson D Knight, Arun Anantharam

Abstract read
In one paragraph

Article in Chemistry and physics of lipids, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Single-molecule phospholipase ABiophysical journal · 2022
    Article
  5. COPII-mediated trafficking at the ER/ERGIC interface.Traffic (Copenhagen, Denmark) · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Noah A SchenkDepartment of Pharmacology, University of Michigan, United States.
Peter J DahlDepartment of Pharmacology, University of Michigan, United States.
Michael G HannaDepartment of Biomolecular Chemistry, University of Wisconsin-Madison School of Medicine and Public Health, United States.
Anjon AudhyaDepartment of Biomolecular Chemistry, University of Wisconsin-Madison School of Medicine and Public Health, United States.
Gregory G TallDepartment of Pharmacology, University of Michigan, United States.
Jefferson D KnightDepartment of Chemistry, University of Colorado Denver, United States. Electronic address: Jefferson.Knight@ucdenver.edu.
Arun AnantharamDepartment of Pharmacology, University of Michigan, United States. Electronic address: arunanan@umich.edu.
Michigan United · USUniversity of Michigan–Ann Arbor · USUniversity of Wisconsin–Madison · USUniversity of Colorado Denver · US

Funding

Training Program In Molecular AND Cellular PharmacologyT32GM008688 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 1998 to 2020
$6.0M
Regulation of Heterotrimeric G proteins by non-receptor activatorsR01GM088242 · NIGMS · UNIVERSITY OF ROCHESTER · PI TALL, GREGORY GORDON · 2009 to 2022
$4.2M
Regulatory mechanisms that control vesicle secretion at the endoplasmic reticulumR01GM110567 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 2015 to 2019
$1.8M
The Impact of Synaptotagmin Isoform Structure and Diversity on Dense Core Granule ExocytosisR01GM111997 · NIGMS · WAYNE STATE UNIVERSITY · PI ANANTHARAM, ARUN · 2015 to 2019
$1.5M
Molecular Mechanisms of Protein-Membrane Interactions Driving Insulin SecretionR15GM102866 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI KNIGHT, JEFFERSON D. · 2014 to 2018
$871k
NIGMS NIH HHS R01 GM088242NIGMS NIH HHS R01 GM110567NIGMS NIH HHS R01 GM111997NIGMS NIH HHS R15 GM102866NIGMS NIH HHS T32 GM008688
6 · The paper itself

Abstract

Fusion and fission of cellular membranes involve dramatic, protein-mediated changes in membrane curvature. Many of the experimental methods useful for investigating curvature sensing or generation require specialized equipment. We have developed a system based on supported lipid bilayers (SLBs) in which lipid tubules are simple to produce and several types of membrane remodeling events can be readily imaged using widely available instrumentation (e.g., tubule fission and/or membrane budding). Briefly, high ionic strength during lipid bilayer deposition results in incorporation of excess lipids in the SLB. After sequentially washing with water and physiological ionic strength buffer solutions, lipid tubules form spontaneously. We find that tubule formation results from solution-dependent spreading of the SLB; washing from water into physiological ionic strength buffer solution leads to expansion of the bilayer and formation of tubules. Conversely, washing from physiological buffer into water results in contraction of the membrane and loss of tubules. We demonstrate the utility of these supported tubulated bilayers, termed "STuBs," with an investigation of Sar1B, a small Ras family G-protein known to influence membrane curvature. The addition of Sar1B to STuBs results in dramatic changes in tubule topology and eventual tubule fission. Overall, STuBs are a simple experimental system, useful for monitoring protein-mediated effects on membrane topology in real time, under physiologically relevant conditions.

Indexed as

Cell MembraneLipid BilayersLiposomesMembrane ProteinsOsmolar ConcentrationWaterLipid BilayersLiposomesMembrane ProteinsWaterEndocytosisExocytosisMembrane fissionSupported bilayerVesicle budding

Identifiers

PMID30012406
PMCPMC6103888
OpenAlexW2884639104

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.