Evidence map›Paper›PMID 30016332›Full record

ArticlePloS one2018

Bank1 and NF-kappaB as key regulators in anti-nucleolar antibody development.

Hammoudi Alkaissi, Said Havarinasab, Jesper Bo Nielsen, Peter Söderkvist, Per Hultman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Mendelian Causes of Autoimmunity: the Lupus Phenotype.Journal of clinical immunology · 2024
    Review
  4. Article
  5. Article
  6. Mercury-induced inflammation and autoimmunity.Biochimica et biophysica acta. General subjects · 2019
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Hammoudi AlkaissiMolecular and Immunological Pathology, Department of Clinical Pathology and Clinical Genetics, Linköping University, Linköping, Sweden.ORCID 0000-0003-4867-105X
Said HavarinasabMolecular and Immunological Pathology, Department of Clinical Pathology and Clinical Genetics, Linköping University, Linköping, Sweden.
Jesper Bo NielsenInstitute of Public Health, Research Unit for General Practice, University of Southern Denmark, Odense C, Denmark.
Peter SöderkvistCell Biology, Department of Clinical and Experimental Medicine, Linköping University, Linköping, Sweden.
Per HultmanMolecular and Immunological Pathology, Department of Clinical Pathology and Clinical Genetics, Linköping University, Linköping, Sweden.
Linköping University · SEUniversity of Southern Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Systemic autoimmune rheumatic disorders (SARD) represent important causes of morbidity and mortality in humans. The mechanisms triggering autoimmune responses are complex and involve a network of genetic factors. Mercury-induced autoimmunity (HgIA) in mice is an established model to study the mechanisms of the development of antinuclear antibodies (ANA), which is a hallmark in the diagnosis of SARD. A.SW mice with HgIA show a significantly higher titer of antinucleolar antibodies (ANoA) than the B10.S mice, although both share the same MHC class II (H-2). We applied a genome-wide association study (GWAS) to their Hg-exposed F2 offspring to investigate the non-MHC genes involved in the development of ANoA. Quantitative trait locus (QTL) analysis showed a peak logarithm of odds ratio (LOD) score of 3.05 on chromosome 3. Microsatellites were used for haplotyping, and fine mapping was conducted with next generation sequencing. The candidate genes Bank1 (B-cell scaffold protein with ankyrin repeats 1) and Nfkb1 (nuclear factor kappa B subunit 1) were identified by additional QTL analysis. Expression of the Bank1 and Nfkb1 genes and their downstream target genes involved in the intracellular pathway (Tlr9, Il6, Tnf) was investigated in mercury-exposed A.SW and B10.S mice by real-time PCR. Bank1 showed significantly lower gene expression in the A.SW strain after Hg-exposure, whereas the B10.S strain showed no significant difference. Nfkb1, Tlr9, Il6 and Tnf had significantly higher gene expression in the A.SW strain after Hg-exposure, while the B10.S strain showed no difference. This study supports the roles of Bank1 (produced mainly in B-cells) and Nfkb1 (produced in most immune cells) as key regulators of ANoA development in HgIA.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsAntibodies, AntinuclearB-LymphocytesFemaleGene Expression RegulationHaplotypesIntracellular SpaceMiceMutation, MissenseNF-kappa BPolymorphism, Single NucleotideToll-Like Receptor 9Adaptor Proteins, Signal TransducingAntibodies, AntinuclearBANK1 protein, mouseNF-kappa BTlr9 protein, mouseToll-Like Receptor 9

Identifiers

PMID30016332
PMCPMC6049909
OpenAlexW2884993552

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.