Evidence map›Paper›PMID 30087126›Full record

ArticleThe Journal of cell biology2018

The inositol 5-phosphatase INPP5K participates in the fine control of ER organization.

Rui Dong, Ting Zhu, Lorena Benedetti, Swetha Gowrishankar, Huichao Deng, Yiying Cai, Xiangming Wang, Kang Shen, Pietro De Camilli

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
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  12. ARL6IP1 mediates small-molecule-induced alleviation of Alzheimer pathology through FXR1-dependent BACE1 translation initiation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Article
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  17. Loss of INPP5K attenuates IPBBA advances · 2023
    Article
  18. Evolution of factors shaping the endoplasmic reticulum.Traffic (Copenhagen, Denmark) · 2022
    Article
  19. Genetic pain loss disorders.Nature reviews. Disease primers · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Rui DongDepartment of Neuroscience, Yale University School of Medicine, New Haven, CT.ORCID 0000-0002-9118-3636
Ting ZhuNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Lorena BenedettiDepartment of Neuroscience, Yale University School of Medicine, New Haven, CT.
Swetha GowrishankarDepartment of Neuroscience, Yale University School of Medicine, New Haven, CT.
Huichao DengNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.ORCID 0000-0002-1758-1820
Yiying CaiDepartment of Neuroscience, Yale University School of Medicine, New Haven, CT.
Xiangming WangNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Kang ShenNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China kangshen@stanford.edu.
Pietro De CamilliDepartment of Neuroscience, Yale University School of Medicine, New Haven, CT pietro.decamilli@yale.edu.ORCID 0000-0001-9045-0723
Howard Hughes Medical Institute · USChinese Academy of Sciences · CN

Funding

Yale Diabetes Research CenterP30DK045735 · NIDDK · YALE UNIVERSITY · PI GERALD I SHULMAN · 1993 to 2026
$44.0M
Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI ANGUS C. NAIRN, Kenneth Robert WILLIAMS · 2004 to 2026
$37.1M
MOLECULAR MECHANISMS IN SYNAPTIC VESICLE RECYCLINGR01NS036251 · NINDS · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 1997 to 2021
$4.7M
Patterning dendritic branches with environmental and neuronal surface moleculesR01NS082208 · NINDS · STANFORD UNIVERSITY · PI KANG SHEN · 2013 to 2026
$4.1M
Molecular Mechanisms in Synaptic Vesicle RecyclingR37NS036251 · NINDS · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 2010 to 2016
$2.7M
OCRL and the pathogenesis of Lowe Syndrome and Dent DiseaseR01DK082700 · NIDDK · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 2009 to 2016
$2.4M
Howard Hughes Medical InstituteNIDA NIH HHS P30 DA018343NIDDK NIH HHS P30 DK045735NIDDK NIH HHS R01 DK082700NINDS NIH HHS R01 NS036251NINDS NIH HHS R01 NS082208NINDS NIH HHS R37 NS036251
6 · The paper itself

Abstract

INPP5K (SKIP) is an inositol 5-phosphatase that localizes in part to the endoplasmic reticulum (ER). We show that recruitment of INPP5K to the ER is mediated by ARL6IP1, which shares features of ER-shaping proteins. Like ARL6IP1, INPP5K is preferentially localized in ER tubules and enriched, relative to other ER resident proteins (Sec61β, VAPB, and Sac1), in newly formed tubules that grow along microtubule tracks. Depletion of either INPP5K or ARL6IP1 results in the increase of ER sheets. In a convergent but independent study, a screen for mutations affecting the distribution of the ER network in dendrites of the PVD neurons of

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsChlorocebus aethiopsCOS CellsDendritesEndoplasmic ReticulumGene DeletionHeLa CellsHumansMicePhosphatidylinositol-3,4,5-Trisphosphate 5-PhosphatasesCaenorhabditis elegans ProteinsPhosphatidylinositol-3,4,5-Trisphosphate 5-Phosphatases

Identifiers

PMID30087126
PMCPMC6168264
OpenAlexW2887748679

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.