Evidence map›Paper›PMID 30099227›Full record

ArticleMolecular immunology2018

SAMHD1 deficient human monocytes autonomously trigger type I interferon.

Alicia Martinez-Lopez, Marta Martin-Fernandez, Sofija Buta, Baek Kim, Dusan Bogunovic, Felipe Diaz-Griffero

Abstract read
In one paragraph

Article in Molecular immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

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  6. When DNA-damage responses meet innate and adaptive immunity.Cellular and molecular life sciences : CMLS · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Alicia Martinez-LopezDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461, United States.
Marta Martin-FernandezDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States.
Sofija ButaDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States.
Baek KimDepartment of Pediatrics, Emory University, Atlanta, GA 30322, United States.
Dusan BogunovicDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States.
Felipe Diaz-GrifferoDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY 10461, United States. Electronic address: Felipe.Diaz-Griffero@einstein.yu.edu.
Icahn School of Medicine at Mount Sinai · USAlbert Einstein College of Medicine · USEmory University · US

Funding

Role of Cellular Factors in Retroviral Uncoating and Synthesis of Viral DNAR01AI087390 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DIAZ-GRIFFERO, FELIPE · 2010 to 2024
$6.8M
Human ISG15 and USP18 Deficiencies Underlying Type I InterferonopathiesR01AI127372 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Dusan Bogunovic · 2017 to 2026
$4.7M
SAMHD1 controls dNTP pool and HIV sensitivity to NRTIsR01GM104198 · NIGMS · UNIVERSITY OF ROCHESTER · PI KIM, BAEK · 2012 to 2018
$2.3M
Defining the microtubule motors which drive the uncoating and trafficking of HIVR01AI120956 · NIAID · LOYOLA UNIVERSITY CHICAGO · PI CAMPBELL, EDWARD M, DIAZ-GRIFFERO, FELIPE · 2015 to 2019
$1.6M
Regulation of SAMHD1 antiviral activityR01GM123540 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DIAZ-GRIFFERO, FELIPE · 2016 to 2018
$1.4M
ZIKA VIRUS RESISTANCE; HOST DETERMINANTSR21AI129827 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BOGUNOVIC, DUSAN · 2017 to 2018
$466k
Interplay between Negative Regulators of Type I Interferon and HIV controlR21AI134366 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BOGUNOVIC, DUSAN, SIMON, VIVIANA A · 2017 to 2018
$466k
Regulation of SAMHD1 antiviral activityR56AI108432 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DIAZ-GRIFFERO, FELIPE · 2014 to 2014
$431k
NIAID NIH HHS R01 AI087390NIAID NIH HHS R01 AI120956NIAID NIH HHS R01 AI127372NIAID NIH HHS R21 AI129827NIAID NIH HHS R21 AI134366NIAID NIH HHS R56 AI108432NIGMS NIH HHS R01 GM104198NIGMS NIH HHS R01 GM123540
6 · The paper itself

Abstract

Germline mutations in the human SAMHD1 gene cause the development of Aicardi-Goutières Syndrome (AGS), with a dominant feature being increased systemic type I interferon(IFN) production. Here we tested the state of type I IFN induction and response to, in SAMHD1 knockout (KO) human monocytic cells. SAMHD1 KO cells exhibited spontaneous transcription and translation of IFN-β and subsequent interferon-stimulated genes (ISGs) as compared to parental wild-type cells. This elevation of IFN-β and ISGs was abrogated via inhibition of the TBK1-IRF3 pathway in the SAMHD1 KO cells. In agreement, we found that SAMHD1 KO cells present high levels of phosphorylated TBK1 when compared to control cells. Moreover, addition of blocking antibody against type I IFN also reversed elevation of ISGs. These experiments suggested that SAMHD1 KO cells are persistently auto-stimulating the TBK1-IRF3 pathway, leading to an enhanced production of type I IFN and subsequent self-induction of ISGs.

Indexed as

Gene Expression RegulationHumansInterferon Type IMonocytesProtein BiosynthesisPyrimidinesSAM Domain and HD Domain-Containing Protein 1Small Molecule LibrariesThiophenesTHP-1 CellsTranscription, GeneticBX795Interferon Type IPyrimidinesSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humanSmall Molecule LibrariesThiophenesAGSIFNISGsSAMHD1TBK1-IRF3

Identifiers

PMID30099227
PMCPMC6258080
OpenAlexW2886559751

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.