Evidence map›Paper›PMID 30108134›Full record

ArticleMolecular systems biology2018

Identification of an oncogenic network with prognostic and therapeutic value in prostate cancer.

Fiorella Magani, Eric R Bray, Maria J Martinez, Ning Zhao, Valeria A Copello, Laine Heidman, Stephanie O Peacock, David J Wiley, Gennaro D'Urso, Kerry L Burnstein

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Fiorella MaganiSheila and David Fuente Graduate Program in Cancer Biology, University of Miami Miller School of Medicine, Miami, FL, USA.
Eric R BrayDepartment of Neurological Surgery, Miami Project to Cure Paralysis, University of Miami Miller School of Medicine, Miami, FL, USA.
Maria J MartinezDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA.
Ning ZhaoDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA.
Valeria A CopelloSheila and David Fuente Graduate Program in Cancer Biology, University of Miami Miller School of Medicine, Miami, FL, USA.ORCID 0000-0002-7035-4467
Laine HeidmanDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA.
Stephanie O PeacockSheila and David Fuente Graduate Program in Cancer Biology, University of Miami Miller School of Medicine, Miami, FL, USA.
David J WileyDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA.
Gennaro D'UrsoDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA.
Kerry L BurnsteinDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL, USA KBurnstein@med.miami.edu.ORCID 0000-0002-7351-0963
University of Miami · US

Funding

Vav3 Oncogene Potentiation of Androgen Receptor Signaling in Prostate Cancer.R01CA132200 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BURNSTEIN, KERRY L · 2009 to 2013
$1.6M
Regulation of androgen receptor in prostate cancer cells in an aged mouse modelF30AG038275 · NIA · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI PEACOCK, STEPHANIE OLGA · 2010 to 2014
$233k
NCI NIH HHS R01 CA132200NIA NIH HHS F30 AG038275
6 · The paper itself

Abstract

Identifying critical pathways governing disease progression is essential for accurate prognosis and effective therapy. We developed a broadly applicable and novel systems-level gene discovery strategy. This approach focused on constitutively active androgen receptor (AR) splice variant-driven pathways as representative of an intractable mechanism of prostate cancer (PC) therapeutic resistance. We performed a meta-analysis of human prostate samples using weighted gene co-expression network analysis combined with experimental AR variant transcriptome analyses. An AR variant-driven gene module that is upregulated during human PC progression was identified. We filtered this module by identifying genes that functionally interacted with AR variants using a high-throughput synthetic genetic array screen in

Indexed as

CarcinogenesisCell Line, TumorCell ProliferationDisease-Free SurvivalDrug Resistance, NeoplasmGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMalePrognosisProstatic NeoplasmsReceptors, AndrogenRNA SplicingSchizosaccharomycesSignal TransductionReceptors, Androgenandrogen receptor splice variantscastration resistancemitotic gene signatureweighted gene co‐expression network analysisyeast synthetic genetic array

Identifiers

PMID30108134
PMCPMC6684952
OpenAlexW2887191912

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.