Evidence map›Paper›PMID 30111768›Full record

ArticleNature communications2018

Genome-wide mapping of plasma protein QTLs identifies putatively causal genes and pathways for cardiovascular disease.

Chen Yao, George Chen, Ci Song, Joshua Keefe, Michael Mendelson, Tianxiao Huan, Benjamin B Sun, Annika Laser, Joseph C Maranville, Hongsheng Wu and 14 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 265 papers, 12 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
265citing papers in PubMed, 12 pooled it
26.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

265 citing papers in PubMed, 12 syntheses or guidelines pooled it, 448 citations in OpenAlex.

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  13. Article
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  15. Article
  16. Proteogenomics in human populations.Nature reviews. Genetics · 2026
    Review
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205 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 5 countries.

Chen YaoFramingham Heart Study, Framingham, 01702, MA, USA.ORCID http://orcid.org/0000-0002-3944-7788
George ChenFramingham Heart Study, Framingham, 01702, MA, USA.
Ci SongFramingham Heart Study, Framingham, 01702, MA, USA.
Joshua KeefeFramingham Heart Study, Framingham, 01702, MA, USA.
Michael MendelsonFramingham Heart Study, Framingham, 01702, MA, USA.
Tianxiao HuanFramingham Heart Study, Framingham, 01702, MA, USA.
Benjamin B SunMRC/BHF Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, CB1 8RN, UK.ORCID http://orcid.org/0000-0001-6347-2281
Annika LaserResearch Unit of Molecular Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany.
Joseph C MaranvilleMRL, Merck & Co., Inc, Kenilworth, 07033, NJ, USA.
Hongsheng WuComputer Science and Networking, Wentworth Institute of Technology, Boston, 02115, MA, USA.
Jennifer E HoCardiovascular Research Center and Division of Cardiology, Department of Medicine, Massachusetts General Hospital, Boston, 02114, MA, USA.
Paul CourchesneFramingham Heart Study, Framingham, 01702, MA, USA.
Asya LyassFramingham Heart Study, Framingham, 01702, MA, USA.
Martin G LarsonFramingham Heart Study, Framingham, 01702, MA, USA.
Christian GiegerResearch Unit of Molecular Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany.
Johannes GraumannScientific Service Group Biomolecular Mass Spectrometry, Max Planck Institute for Heart and Lung Research, W.G. Kerckhoff Institute, Ludwigstr. 43, D-61231, Bad Nauheim, Germany.ORCID http://orcid.org/0000-0002-3015-5850
Andrew D JohnsonFramingham Heart Study, Framingham, 01702, MA, USA.
John DaneshMRC/BHF Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, CB1 8RN, UK.
Heiko RunzMRL, Merck & Co., Inc, Kenilworth, 07033, NJ, USA.
Shih-Jen HwangFramingham Heart Study, Framingham, 01702, MA, USA.
Chunyu LiuFramingham Heart Study, Framingham, 01702, MA, USA.
Adam S ButterworthMRC/BHF Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Cambridge, CB1 8RN, UK.ORCID http://orcid.org/0000-0002-6915-9015
Karsten SuhreDepartment of Physiology and Biophysics, Weill Cornell Medicine-Qatar, Education City, PO 24144, Doha, Qatar.ORCID http://orcid.org/0000-0001-9638-3912
Daniel LevyFramingham Heart Study, Framingham, 01702, MA, USA. levyd@nih.gov.
National Institutes of Health · USUniversity of Cambridge · GBBoston University · USHelmholtz Zentrum München · DEMerck & Co., Inc., Rahway, NJ, USA (United States) · USBoston Children's Hospital · USMassachusetts General Hospital · USMax Planck Institute for Heart and Lung Research · DEUppsala University · SEWeill Cornell Medical College in Qatar · QAWentworth Institute of Technology · US

Funding

Framingham Project/LevyZIAHL006001 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEVY, DANIEL · 2009 to 2025
$51.1M
Cardiovascular Genomics and Bioinformatics projectsZIAHL006170 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI JOHNSON, ANDREW · 2013 to 2025
$25.3M
The Role of Galectin-3 in Cardiac Remodeling and Heart FailureK23HL116780 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI HO, JENNIFER E · 2013 to 2017
$832k
Circulating Epigenetic Biomarkers for Personalized Cardiovascular Disease PreventionK99HL136875 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI MENDELSON, MICHAEL MAXWELL · 2017 to 2018
$330k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
British Heart Foundation RG/13/13/30194European Research Council 268834Medical Research Council G0800270Medical Research Council MR/L003120/1NHLBI NIH HHS K23 HL116780NHLBI NIH HHS K99 HL136875NHLBI NIH HHS N01 HC025195
6 · The paper itself

Abstract

Identifying genetic variants associated with circulating protein concentrations (protein quantitative trait loci; pQTLs) and integrating them with variants from genome-wide association studies (GWAS) may illuminate the proteome's causal role in disease and bridge a knowledge gap regarding SNP-disease associations. We provide the results of GWAS of 71 high-value cardiovascular disease proteins in 6861 Framingham Heart Study participants and independent external replication. We report the mapping of over 16,000 pQTL variants and their functional relevance. We provide an integrated plasma protein-QTL database. Thirteen proteins harbor pQTL variants that match coronary disease-risk variants from GWAS or test causal for coronary disease by Mendelian randomization. Eight of these proteins predict new-onset cardiovascular disease events in Framingham participants. We demonstrate that identifying pQTLs, integrating them with GWAS results, employing Mendelian randomization, and prospectively testing protein-trait associations holds potential for elucidating causal genes, proteins, and pathways for cardiovascular disease and may identify targets for its prevention and treatment.

Indexed as

Genome-Wide Association StudyAdultBlood ProteinsCardiovascular DiseasesChromosome MappingFemaleGene Expression ProfilingGenetic Predisposition to DiseaseHumansMaleMiddle AgedPolymorphism, Single NucleotideQuantitative Trait LociRisk FactorsSignal TransductionBlood Proteins

Identifiers

PMID30111768
PMCPMC6093935
OpenAlexW2886245587

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.