Evidence map›Paper›PMID 30120147›Full record

ArticleRNA (New York, N.Y.)2018

Combinatorial interplay of RNA-binding proteins tunes levels of mitochondrial mRNA in trypanosomes.

Sameer Dixit, Julius Lukeš

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sameer DixitInstitute of Parasitology, Biology Center, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, 37005 České Budějovice (Budweis), Czech Republic.
Julius LukešInstitute of Parasitology, Biology Center, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, 37005 České Budějovice (Budweis), Czech Republic.
Czech Academy of Sciences · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MRP1/2 is a heteromeric protein complex that functions in the trypanosomatid mitochondrion as part of the RNA editing machinery, which facilitates multiple targeted insertions and deletions of uridines. MRP1/2 was shown to interact with MRB8170, which initiates RNA editing by marking pre-edited mRNAs, while TbRGG2 is required for its efficient progression on pan-edited mRNAs. Both MRP1/2 and TbRGG2 are capable of modulating RNA-RNA interactions in vitro. As determined by using iCLIP and RIP-qPCR, RNAs bound to MRP1/2 are characterized and compared with those associated with MRB8170 and TbRGG2. We provide evidence that MRP1 and MRB8170 have correlated binding and similar RNA crosslinking peak profiles over minimally and never-edited mRNAs. Our results suggest that MRP1 assists MRB8170 in RNA editing on minimally edited mRNAs.

Indexed as

MitochondriaProtein BindingProtozoan ProteinsRNA-Binding ProteinsRNA EditingRNA, MessengerRNA, MitochondrialTrypanosomagBP21 protein, Trypanosoma bruceimitochondrial messenger RNAProtozoan ProteinsRNA-Binding ProteinsRNA, MessengerRNA, MitochondrialiCLIPmitochondrionribonuclear proteinRNA binding proteinsRNA editingtrypanosome

Identifiers

PMID30120147
PMCPMC6191715
OpenAlexW2887571599

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.