Evidence map›Paper›PMID 30209741›Full record

ArticleMolecular biology reports2018

Map-based cloning and validation of a gall midge resistance gene, Gm8, encoding a proline-rich protein in the rice variety Aganni.

D Divya, Nihar Sahu, Suresh Nair, J S Bentur

Abstract read
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In one paragraph

Article in Molecular biology reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Genetic analysis and fine mapping of the gall midge resistance gene Gm5 in rice (Oryza sativa L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  8. Article
  9. Characterization and application of a gall midge resistance gene (Gm6) from Oryza sativa 'Kangwenqingzhan'.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

D DivyaICAR-Indian Institute of Rice Research, Rajendranagar, Hyderabad, 500030, India. divi41@gmail.com.ORCID http://orcid.org/0000-0003-2442-1152
Nihar SahuICAR-Indian Institute of Rice Research, Rajendranagar, Hyderabad, 500030, India.ORCID http://orcid.org/0000-0003-4118-5593
Suresh NairInternational Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India.
J S BenturICAR-Indian Institute of Rice Research, Rajendranagar, Hyderabad, 500030, India.ORCID http://orcid.org/0000-0002-0210-2655
Indian Institute of Rice Research · INInternational Centre for Genetic Engineering and Biotechnology · IN

Funding

Department of Biotechnology, Ministry of Science and Technology (F. No: BT/AB/FG-2 (PH-II)(4A)/2009)Department of Biotechnology, Ministry of Science and Technology (F.No: BT/AB/FG-2 (PH-II)(4B)/2009)
6 · The paper itself

Abstract

The Asian rice gall midge (ARGM), Orseolia oryzae is an important insect pest causing an annual yield loss of about US$ 80 million in India. Till now 11 R genes and seven biotypes of the pest have been characterized and reported. The indica rice variety Aganni, a landrace from the state of Kerala, is known to carry the gall midge resistance gene Gm8 with HR-type of resistance. This gene has been fine mapped within 0.43 Mb region with the flanking markers RM22685 and RM22709. We identified 63 possible candidate genes through in silico analysis in the reference Nipponbare rice genome between 7.5 and 9.5 Mb region. One of the markers targeting the proline rich protein (PRP) gene (LOC_Os08g15080) showed polymorphism between the parents and also exhibited complete co-segregation with the trait in 426 F

Indexed as

AnimalsChromosome MappingDipteraDisease ResistanceHost-Parasite InteractionsIndiaOryzaPlant DiseasesPlant ProteinsProlinePlant ProteinsProlineAganniGm8HR-type of resistancePre-NILsPRP

Identifiers

PMID30209741
OpenAlexW2890714655

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.