Evidence map›Paper›PMID 30230100›Full record

ArticleMolecular reproduction and development2018

Combined functions of two RRMs in Dead-end1 mimic helicase activity to promote nanos1 translation in the germline.

Tristan Aguero, Zhigang Jin, Dawn Owens, Arun Malhotra, Karen Newman, Jing Yang, Mary Lou King

Open access · bronzeAbstract read
In one paragraph

Article in Molecular reproduction and development, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Biochemistry and biophysics reports · 2022
    Article
  5. Animals : an open access journal from MDPI · 2021
    Article
  6. Review
  7. Human DND1-RRM2 forms a non-canonical domain swapped dimer.Protein science : a publication of the Protein Society · 2021
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 4 countries.

Tristan AgueroDepartment of Cell Biology University of Miami, Miller School of Medicine, Miami, Florida.ORCID 0000-0002-5651-5316
Zhigang JinDepartment of Comparative Biosciences, University of Illinois at Urbana-Champaign, Urbana, Illinois.
Dawn OwensDepartment of Cell Biology University of Miami, Miller School of Medicine, Miami, Florida.
Arun MalhotraDepartment of Biochemistry and Molecular Biology, Miller School of Medicine, University of Miami, Miami, Florida.ORCID 0000-0001-6656-7841
Karen NewmanDepartment of Cell Biology University of Miami, Miller School of Medicine, Miami, Florida.
Jing YangDepartment of Comparative Biosciences, University of Illinois at Urbana-Champaign, Urbana, Illinois.ORCID 0000-0002-4983-1660
Mary Lou KingDepartment of Cell Biology University of Miami, Miller School of Medicine, Miami, Florida.
University of Miami · USUniversity of Illinois Urbana-Champaign · USZhejiang Normal University · CN

Funding

Maternal control of germline developmentR35GM131810 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI Jing Yang · 2019 to 2026
$3.2M
Role of Translational Regulators Nanos and Dazl in Preserving TotipotencyR01GM102397 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI KING, MARY LOU · 2013 to 2016
$1.5M
Dnd1 and repression of transcription in primordial germ cellsR01GM111816 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI YANG, JING · 2015 to 2018
$1.2M
NIGMS NIH HHS NIH R01GM111816NIGMS NIH HHS R01 GM102397NIGMS NIH HHS R01GM102397NIGMS NIH HHS R01 GM111816NIGMS NIH HHS R35 GM131810
6 · The paper itself

Abstract

Dead-end1 (Dnd1) expression is restricted to the vertebrate germline where it is believed to activate translation of messenger RNAs (mRNAs) required to protect and promote that unique lineage. Nanos1 is one such germline mRNA whose translation is blocked by a secondary mRNA structure within the open reading frame (ORF). Dnd1 contains a canonical RNA recognition motif (RRM1) in its N-terminus but also contains a less conserved RRM2. Here we provide a mechanistic picture of the nanos1 mRNA-Dnd1 interaction in the Xenopus germline. We show that RRM1, but not RRM2, is required for binding nanos1. Similar to the zebrafish homolog, Xenopus Dnd1 possesses ATPase activity. Surprisingly, this activity appears to be within the RRM2, different from the C-terminal region where it is found in zebrafish. More importantly, we show that RRM2 is required for nanos1 translation and germline survival. Further, Dnd1 functions as a homodimer and binds nanos1 mRNA just downstream of the secondary structure required for nanos1 repression. We propose a model in which the RRM1 is required to bind nanos1 mRNA while the RRM2 is required to promote translation through the action of ATPase. Dnd1 appears to use RRMs to mimic the function of helicases.

Indexed as

Models, BiologicalProtein BiosynthesisRepressor ProteinsRNA-Binding ProteinsRNA HelicasesRNA, MessengerXenopus ProteinsAnimalsProtein DomainsRNA Recognition MotifXenopus laevisDnd1 protein, Xenopusnanos1 protein, XenopusRepressor ProteinsRNA-Binding ProteinsRNA HelicasesRNA, MessengerXenopus ProteinsDead-end1germline developmentnanos1translational regulationXenopus

Identifiers

PMID30230100
PMCPMC6294668
OpenAlexW2890885126

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.