Evidence map›Paper›PMID 30246236›Full record

ArticleCardiology journal2020

Identification of biomarkers and mechanisms of diabetic cardiomyopathy using microarray data.

Hui Li, Xiaoyan Li, Jian Guo, Guifu Wu, Chunping Dong, Yaling Pang, Shan Gao, Yangwei Wang

Open access · goldAbstract read
In one paragraph

Article in Cardiology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Hui LiDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Xiaoyan LiDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Jian GuoDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Guifu WuDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Chunping DongDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Yaling PangDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Shan GaoDepartment of Endocrinology, Shaanxi Provincial People's Hospital.
Yangwei WangDepartment of Endocrinology, Shaanxi Provincial People's Hospital. yangweiwang15@hotmail.com.
Shaanxi Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe study aimed to uncover the regulation mechanisms of diabetic cardiomyopathy (DCM) and provide novel prognostic biomarkers.

methodsThe dataset GSE62203 downloaded from the Gene Expression Omnibus database was utilized in the present study. After pretreatment using the Affy package, differentially expressed genes (DEGs) were identified by the limma package, followed by functional enrichment analysis and protein- protein interaction (PPI) network analysis. Furthermore, module analysis was conducted using MCODE plug-in of Cytoscape, and functional enrichment analysis was also performed for genes in the modules.

resultsA set of 560 DEGs were screened, mainly enriched in the metabolic process and cell cycle related process. Hub nodes in the PPI network were LDHA (lactate dehydrogenase A), ALDOC (aldolase C, fructose-bisphosphate) and ABCE1 (ATP Binding Cassette Subfamily E Member 1), which were also highlighted in Module 1 or Module 2 and predominantly enriched in the processes of glycolysis and ribosome biogenesis. Additionally, LDHA were linked with ALDOC in the PPI network. Besides, activating transcription factor 4 (ATF4) was prominent in Module 3; while myosin heavy chain 6 (MYH6) was highlighted in Module 4 and was mainly involved in muscle cells related biological processes.

conclusionsFive potential biomarkers including LDHA, ALDOC, ABCE1, ATF4 and MYH6 were identified for DCM prognosis.

Indexed as

Diabetes MellitusDiabetic CardiomyopathiesBiomarkersGene Expression ProfilingGene Regulatory NetworksHumansMicroarray AnalysisBiomarkersdiabetic cardiomyopathydifferential analysisexpression profileglycolysismodule analysisribosome biogenesis

Identifiers

PMID30246236
PMCPMC8079087
OpenAlexW2893470089

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.