Evidence map›Paper›PMID 30257935›Full record

ArticleGenetics2018

Protein Isoprenylation in Yeast Targets COOH-Terminal Sequences Not Adhering to the CaaX Consensus.

Brittany M Berger, June H Kim, Emily R Hildebrandt, Ian C Davis, Michael C Morgan, James L Hougland, Walter K Schmidt

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Comprehensive analysis of CXXX sequence space reveals thatbioRxiv : the preprint server for biology · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. PKC98E Regulates Odorant Responses inThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Brittany M BergerDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
June H KimDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Emily R HildebrandtDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Ian C DavisDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
Michael C MorganDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602.
James L HouglandDepartment of Chemistry, Syracuse University, New York 13244.ORCID 0000-0003-0444-1017
Walter K SchmidtDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602 wschmidt@uga.edu.
University of Georgia · USSyracuse University · US

Funding

Role of Proteolysis in Regulating CaaX Protein FunctionR01GM117148 · NIGMS · UNIVERSITY OF GEORGIA · PI SCHMIDT, WALTER K · 2016 to 2019
$1.2M
NIGMS NIH HHS R01 GM117148
6 · The paper itself

Abstract

Protein isoprenylation targets a subset of COOH-terminal Cxxx tetrapeptide sequences that has been operationally defined as a CaaX motif. The specificity of the farnesyl transferase toward each of the possible 8000 combinations of Cxxx sequences, however, remains largely unresolved. In part, it has been difficult to consolidate results stemming from

Indexed as

Alkyl and Aryl TransferasesAmino Acid MotifsAmino Acid SequenceHSP40 Heat-Shock ProteinsProtein PrenylationProtein Processing, Post-Translationalras ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAlkyl and Aryl TransferasesHSP40 Heat-Shock Proteinsp21(ras) farnesyl-protein transferaseras ProteinsSaccharomyces cerevisiae ProteinsYDJ1 protein, S cerevisiaeCaaXfarnesyl transferaseHsp40isoprenylationthermotolerance

Identifiers

PMID30257935
PMCPMC6283164
OpenAlexW2894334824

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.