Evidence map›Paper›PMID 30295986›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2018

Identification of Novel Gata3 Distal Enhancers Active in Mouse Embryonic Lens.

Elena Martynova, Maxime Bouchard, Linda S Musil, Ales Cvekl

Open access · hybridAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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  8. AProceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Elena MartynovaDepartments of Ophthalmology and Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, New York.
Maxime BouchardGoodman Cancer Research Centre and Department of Biochemistry, McGill University, Montreal, Quebec, Canada.
Linda S MusilDepartment of Biochemistry and Molecular Biology, Oregon Health Science University, Portland, Oregon.
Ales CveklDepartments of Ophthalmology and Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, New York.ORCID 0000-0002-3957-789X
Albert Einstein College of Medicine · USMcGill University Health Centre · CAOregon Health & Science University · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI Ulrich Steidl · 1985 to 2026
$111.2M
PAX-6 AS A KEY REGULATOR OF LENS DEVELOPMENTR01EY012200 · NEI · YESHIVA UNIVERSITY · PI CVEKL, ALES · 2000 to 2025
$13.1M
New strategies for prevention of posterior capsule opacificationR01EY028558 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI MUSIL, LINDA S · 2018 to 2022
$1.9M
NCI NIH HHS P30 CA013330NEI NIH HHS R01 EY012200NEI NIH HHS R01 EY028558
6 · The paper itself

Abstract

backgroundThe tissue-specific transcriptional programs during normal development require tight control by distal cis-regulatory elements, such as enhancers, with specific DNA sequences recognized by transcription factors, coactivators, and chromatin remodeling enzymes. Gata3 is a sequence-specific DNA-binding transcription factor that regulates formation of multiple tissues and organs, including inner ear, lens, mammary gland, T-cells, urogenital system, and thyroid gland. In the eye, Gata3 has a highly restricted expression domain in the posterior part of the lens vesicle; however, the underlying regulatory mechanisms are unknown.

resultsHere we describe the identification of a novel bipartite Gata3 lens-specific enhancer located ∼18 kb upstream from its transcriptional start site. We also found that a 5-kb Gata3 promoter possesses low activity in the lens. The bipartite enhancer contains arrays of AP-1, Ets-, and Smad1/5-binding sites as well as binding sites for lens-associated DNA-binding factors. Transient transfection studies of the promoter with the bipartite enhancer showed enhanced activation by BMP4 and FGF2.

conclusionsThese studies identify a novel distal enhancer of Gata3 with high activity in lens and indicate that BMP and FGF signaling can up-regulate expression of Gata3 in differentiating lens fiber cells through the identified Gata3 enhancer and promoter elements. Developmental Dynamics 247:1186-1198, 2018. © 2018 The Authors. Developmental Dynamics published by Wiley Periodicals, Inc. on behalf of American Association of Anatomists.

Indexed as

Enhancer Elements, GeneticAnimalsBinding SitesBone Morphogenetic Protein 4DNA-Binding ProteinsFibroblast Growth Factor 2GATA3 Transcription FactorLens, CrystallineMicePromoter Regions, GeneticTranscriptional ActivationBmp4 protein, mouseBone Morphogenetic Protein 4DNA-Binding ProteinsFibroblast Growth Factor 2Gata3 protein, mouseGATA3 Transcription FactorBMP signalingenhancerFGF signalinglenspromoter

Identifiers

PMID30295986
PMCPMC6246825
OpenAlexW2896034978

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.