Evidence map›Paper›PMID 30356223›Full record

ArticleHeredity2019

Recombination and intraspecific polymorphism for the presence and absence of entire chromosomes in mitochondrial genomes.

Zhiqiang Wu, Daniel B Sloan

Open access · bronzeAbstract read
In one paragraph

Article in Heredity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Review
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  12. Article
  13. Super-large record-breaking mitochondrial genome ofFrontiers in plant science · 2025
    Article
  14. Article
  15. The Complete Mitogenome ofInternational journal of molecular sciences · 2024
    Article
  16. Article
  17. Genome copy number predicts extreme evolutionary rate variation in plant mitochondrial DNA.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. Organelle Genomes ofInternational journal of molecular sciences · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Zhiqiang WuDepartment of Biology, Colorado State University, Fort Collins, CO, 80523, USA. wu.zhiqiang.1020@gmail.com.ORCID http://orcid.org/0000-0002-4238-7317
Daniel B SloanDepartment of Biology, Colorado State University, Fort Collins, CO, 80523, USA.ORCID http://orcid.org/0000-0002-3618-0897
Colorado State University · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Causes of Extreme Mitochondrial Mutation Rate VariationR01GM118046 · NIGMS · COLORADO STATE UNIVERSITY · PI SLOAN, DANIEL BENJAMIN · 2017 to 2021
$1.5M
Foundation for the National Institutes of Health (Foundation for the National Institutes of Health, Inc.) GM118046NCI NIH HHS P30 CA046934NIGMS NIH HHS R01 GM118046
6 · The paper itself

Abstract

Although mitochondrial genomes are typically thought of as single circular molecules, these genomes are fragmented into multiple chromosomes in many eukaryotes, raising intriguing questions about inheritance and (in)stability of mtDNA in such systems. A previous comparison of mitochondrial genomes from two different individuals of the angiosperm species Silene noctiflora found variation in the presence of entire mitochondrial chromosomes. Here, we expand on this work with a geographically diverse sampling of 25 S. noctiflora populations and the closely related species S. turkestanica and S. undulata. Using a combination of deep sequencing and PCR-based screening for the presence of 22 different mitochondrial chromosomes, we found extensive variation in the complement of chromosomes across individuals. Much of this variation could be attributed to recent chromosome loss events, suggesting that the massively expanded and fragmented mitochondrial genomes of S. noctiflora may have entered a phase of genome reduction in which they are losing entire chromosomes at a rapid rate. Sequence analysis of mitochondrial and plastid genomes revealed genealogical differences both between these organelles and within the mitochondrial genome, indicating a history of recombination. Evidence that recombination has generated novel combinations of alleles was more frequent between loci on different mitochondrial chromosomes than it was within chromosomes. Therefore, the fragmentation of mitochondrial genomes and the assortment of chromosomes during mitochondrial inheritance appears to have contributed to a history of sexual-like recombination in the mtDNA of this species.

Indexed as

Polymorphism, GeneticRecombination, GeneticChromosomesDNA, MitochondrialEvolution, MolecularGenes, MitochondrialGenome, MitochondrialGenome, PlantGenome, PlastidPhylogenySileneDNA, Mitochondrial

Identifiers

PMID30356223
PMCPMC6461862
OpenAlexW2898265340

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.