Evidence map›Paper›PMID 30382349›Full record

ArticleMolecular genetics and genomics : MGG2019

Evidence of the functional role of the ethylene receptor genes SlETR4 and SlETR5 in ethylene signal transduction in tomato.

Syariful Mubarok, Ken Hoshikawa, Yoshihiro Okabe, Ryoichi Yano, Matthew Duc Tri, Tohru Ariizumi, Hiroshi Ezura

Abstract read
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In one paragraph

Article in Molecular genetics and genomics : MGG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Parthenocarpic tomato mutants,Frontiers in plant science · 2023
    Article
  6. Review
  7. Is it the end of TILLING era in plant science?Frontiers in plant science · 2023
    Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Syariful MubarokDepartment of Agronomy, Faculty of Agriculture, Padjadjaran University, Bandung, 45363, Indonesia.
Ken HoshikawaFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan.
Yoshihiro OkabeFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan.
Ryoichi YanoFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan.
Matthew Duc TriInstitute of Tropical Biology, 9/621, Hanoi, Vietnam.
Tohru AriizumiFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan.
Hiroshi EzuraFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan. ezura.hiroshi.fa@u.tsukuba.ac.jp.ORCID http://orcid.org/0000-0001-9393-3229
University of Tsukuba · JPInternational Center for Tropical Agriculture · VN

Funding

Japan Society for the Promotion of Science 25252008
6 · The paper itself

Abstract

Ethylene receptors are key factors for ethylene signal transduction. In tomato, six ethylene receptor genes (SlETR1-SlETR6) have been identified. Mutations in different ethylene receptor genes result in different phenotypes that are useful for elucidating the roles of each gene. In this study, we screened mutants of two ethylene receptor genes, SLETR4 and SLETR5, from a Micro-Tom mutant library generated by TILLING. We identified two ethylene receptor mutants with altered phenotypes and named them Sletr4-1 and Sletr5-1. Sletr4-1 has a mutation between the transmembrane and GAF domains, while Sletr5-1 has a mutation within the GAF domain. Sletr4-1 showed increased hypocotyl and root lengths, compared to those of wild type plants, under ethylene exposure. Moreover, the fruit shelf life of this mutant was extended, titratable acidity was increased and total soluble solids were decreased, suggesting a reduced ethylene sensitivity. In contrast, in the absence of exogenous ethylene, the hypocotyl and root lengths of Sletr5-1 were shorter than those of the wild type, and the fruit shelf life was shorter, suggesting that these mutants have increased ethylene sensitivity. Gene expression analysis showed that SlNR was up-regulated in the Sletr5-1 mutant line, in contrast to the down-regulation observed in the Sletr4-1 mutant line, while the down-regulation of SlCTR1, SlEIN2, SlEIL1, SlEIL3, and SlERF.E4 was observed in Sletr4-1 mutant allele, suggesting that these two ethylene receptors have functional roles in ethylene signalling and demonstrating, for the first time, a function of the GAF domain of ethylene receptors. These results suggest that the Sletr4-1 and Sletr5-1 mutants are useful for elucidating the complex mechanisms of ethylene signalling through the analysis of ethylene receptors in tomato.

Indexed as

AllelesEthylenesGene Expression Regulation, PlantMutationPhenotypePlant ProteinsReceptors, Cell SurfaceSignal TransductionSolanum lycopersicumethyleneethylene receptors, plantEthylenesPlant ProteinsReceptors, Cell SurfaceEthylene receptorGene expressionMutantTomato

Identifiers

PMID30382349
OpenAlexW2899236393

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.