Evidence map›Paper›PMID 30397333›Full record

ArticleNature genetics2019

Comparative genomics of the major parasitic worms.

International Helminth Genomes Consortium

Open access · bronzeAbstract read
In one paragraph

Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 285 papers.

0numbers the graph read from it
0cells of the map it votes in
285citing papers in PubMed
54.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

285 citing papers in PubMed, 592 citations in OpenAlex.

  1. Review
  2. Chromosome-Scale Genome of Zoonotic EyewormAnimals : an open access journal from MDPI · 2026
    Article
  3. International journal of molecular sciences · 2026
    Article
  4. Assembly of a high-quality reference genome for the rat tapewormbioRxiv : the preprint server for biology · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Local host fish-Food and waterborne parasitology · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. TrueFrontiers in cellular and infection microbiology · 2026
    Article

225 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

International Helminth Genomes Consortium
Wellcome Sanger Institute · GB

Funding

Large Scale Genome SequencingU54HG003079 · NHGRI · WASHINGTON UNIVERSITY · PI DUTCHER, SUSAN K · 2004 to 2016
$445.7M
COMPARATIVE GENOMICS OF PARASITIC NEMATODESR01AI081803 · NIAID · WASHINGTON UNIVERSITY · PI MITREVA, MAKEDONKA · 2009 to 2018
$3.1M
EVOLUTION OF THE NEMATODE INTESTINE, A KEY HOST INTERFACER01GM097435 · NIGMS · WASHINGTON UNIVERSITY · PI MITREVA, MAKEDONKA · 2011 to 2019
$2.1M
COMPARATIVE GENOMICS OF PARASITIC NEMATODESR56AI081803 · NIAID · WASHINGTON UNIVERSITY · PI MITREVA, MAKEDONKA · 2019 to 2019
$697k
Metabolic network reconstruction in Filaria-Wolbachia symbiosisR21AI126466 · NIAID · NEW YORK UNIVERSITY · PI GHEDIN, ELODIE, PARKINSON, JOHN · 2016 to 2017
$377k
Uncovering new mechanisms of nematode anthelmintic resistanceK22AI125473 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI ZAMANIAN, MOSTAFA · 2017 to 2018
$269k
Biotechnology and Biological Sciences Research Council REI18431Medical Research Council MC_PC_18048Medical Research Council MR/K01207X/1Medical Research Council MR/L001020/1Medical Research Council MR/S000453/1NHGRI NIH HHS U54 HG003079NIAID NIH HHS K22 AI125473NIAID NIH HHS R01 AI081803NIAID NIH HHS R21 AI126466NIAID NIH HHS R56 AI081803NIGMS NIH HHS R01 GM097435Wellcome Trust
6 · The paper itself

Abstract

Parasitic nematodes (roundworms) and platyhelminths (flatworms) cause debilitating chronic infections of humans and animals, decimate crop production and are a major impediment to socioeconomic development. Here we report a broad comparative study of 81 genomes of parasitic and non-parasitic worms. We have identified gene family births and hundreds of expanded gene families at key nodes in the phylogeny that are relevant to parasitism. Examples include gene families that modulate host immune responses, enable parasite migration though host tissues or allow the parasite to feed. We reveal extensive lineage-specific differences in core metabolism and protein families historically targeted for drug development. From an in silico screen, we have identified and prioritized new potential drug targets and compounds for testing. This comparative genomics resource provides a much-needed boost for the research community to understand and combat parasitic worms.

Indexed as

AnimalsGenomeGenomicsHelminthsHumansNematodaPhylogeny

Identifiers

PMID30397333
PMCPMC6349046
OpenAlexW2780728213

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.